Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3880A0A1B0GSB3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3880A0A1B0GSB3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3880A0A1B0GSB3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3880A0A1B0GSB3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3880A0A1B0GSB3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3880A0A1B0GSB3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3880A0A1B0GSB3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3880A0A1B0GSB3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3880A0A1B0GSB3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3880A0A1B0GSB3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3880A0A1B0GSB3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3880A0A1B0GSB3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3880A0A1B0GSB3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3880A0A1B0GSB3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3880A0A1B0GSB3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3880A0A1B0GSB3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3880A0A1B0GSB3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3880A0A1B0GSB3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3880A0A1B0GSB3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm3880A0A1B0GSB3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3880A0A1B0GSB3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm3880A0A1B0GSB3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3880A0A1B0GSB3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3880A0A1B0GSB3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3880A0A1B0GSB3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3880A0A1B0GSB3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3880A0A1B0GSB3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gm3880A0A1B0GSB3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3880A0A1B0GSB3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3880A0A1B0GSB3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3880A0A1B0GSB3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3880A0A1B0GSB3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3880A0A1B0GSB3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3880A0A1B0GSB3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm3880A0A1B0GSB3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3880A0A1B0GSB3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Gm15045-201ENSMUST00000117359 883 ntBASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3880A0A1B0GSB3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3880A0A1B0GSB3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3880A0A1B0GSB3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3880A0A1B0GSB3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm3880A0A1B0GSB3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm3880A0A1B0GSB3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3880A0A1B0GSB3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3880A0A1B0GSB3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3880A0A1B0GSB3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3880A0A1B0GSB3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3880A0A1B0GSB3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3880A0A1B0GSB3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3880A0A1B0GSB3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3880A0A1B0GSB3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms