Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Gm11599-201ENSMUST00000118720 878 ntBASIC20.17■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms