Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Gm26833-201ENSMUST00000180899 440 ntBASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Gm40848-201ENSMUST00000221998 324 ntBASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lsm4Q9QXA5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm4Q9QXA5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm4Q9QXA5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm4Q9QXA5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Gm13146-201ENSMUST00000118508 780 ntBASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Gm6139-201ENSMUST00000079261 882 ntBASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm4Q9QXA5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.19□□□□□ -0.14
Lsm4Q9QXA5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms