Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h8Q9JJ48 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.19■■□□□ 1.3
Zc3h8Q9JJ48 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Zc3h8Q9JJ48 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zc3h8Q9JJ48 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zc3h8Q9JJ48 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h8Q9JJ48 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h8Q9JJ48 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.18■■□□□ 1.3
Zc3h8Q9JJ48 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Zc3h8Q9JJ48 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Zc3h8Q9JJ48 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Zc3h8Q9JJ48 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.14■■□□□ 1.29
Zc3h8Q9JJ48 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.14■■□□□ 1.29
Zc3h8Q9JJ48 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.13■■□□□ 1.29
Zc3h8Q9JJ48 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Zc3h8Q9JJ48 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Zc3h8Q9JJ48 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Zc3h8Q9JJ48 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zc3h8Q9JJ48 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zc3h8Q9JJ48 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Zc3h8Q9JJ48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Zc3h8Q9JJ48 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Zc3h8Q9JJ48 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3h8Q9JJ48 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h8Q9JJ48 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Zc3h8Q9JJ48 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Zc3h8Q9JJ48 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.04■■□□□ 1.28
Zc3h8Q9JJ48 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Zc3h8Q9JJ48 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Zc3h8Q9JJ48 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Zc3h8Q9JJ48 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Zc3h8Q9JJ48 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Zc3h8Q9JJ48 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Zc3h8Q9JJ48 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Zc3h8Q9JJ48 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.99■■□□□ 1.27
Zc3h8Q9JJ48 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.97■■□□□ 1.27
Zc3h8Q9JJ48 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Zc3h8Q9JJ48 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zc3h8Q9JJ48 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zc3h8Q9JJ48 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Zc3h8Q9JJ48 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Zc3h8Q9JJ48 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Zc3h8Q9JJ48 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Zc3h8Q9JJ48 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.93■■□□□ 1.26
Zc3h8Q9JJ48 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
Zc3h8Q9JJ48 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.93■■□□□ 1.26
Zc3h8Q9JJ48 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.92■■□□□ 1.26
Zc3h8Q9JJ48 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h8Q9JJ48 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Zc3h8Q9JJ48 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h8Q9JJ48 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h8Q9JJ48 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h8Q9JJ48 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Zc3h8Q9JJ48 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h8Q9JJ48 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h8Q9JJ48 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.89■■□□□ 1.25
Zc3h8Q9JJ48 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h8Q9JJ48 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h8Q9JJ48 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h8Q9JJ48 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h8Q9JJ48 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.85■■□□□ 1.25
Zc3h8Q9JJ48 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h8Q9JJ48 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Zc3h8Q9JJ48 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Zc3h8Q9JJ48 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Zc3h8Q9JJ48 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zc3h8Q9JJ48 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Zc3h8Q9JJ48 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.8■■□□□ 1.24
Zc3h8Q9JJ48 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Zc3h8Q9JJ48 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Zc3h8Q9JJ48 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h8Q9JJ48 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h8Q9JJ48 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.79■■□□□ 1.24
Zc3h8Q9JJ48 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h8Q9JJ48 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Zc3h8Q9JJ48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Zc3h8Q9JJ48 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Zc3h8Q9JJ48 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Zc3h8Q9JJ48 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Zc3h8Q9JJ48 Zxda-201ENSMUST00000117281 2621 ntBASIC22.76■■□□□ 1.23
Zc3h8Q9JJ48 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Zc3h8Q9JJ48 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.75■■□□□ 1.23
Zc3h8Q9JJ48 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Zc3h8Q9JJ48 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.74■■□□□ 1.23
Zc3h8Q9JJ48 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h8Q9JJ48 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h8Q9JJ48 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.73■■□□□ 1.23
Zc3h8Q9JJ48 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Zc3h8Q9JJ48 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms