Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdha11Q91Y19 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Pcdha11Q91Y19 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdha11Q91Y19 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdha11Q91Y19 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha11Q91Y19 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha11Q91Y19 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha11Q91Y19 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdha11Q91Y19 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdha11Q91Y19 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Pcdha11Q91Y19 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdha11Q91Y19 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdha11Q91Y19 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.24■■□□□ 1.79
Pcdha11Q91Y19 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdha11Q91Y19 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha11Q91Y19 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.23■■□□□ 1.79
Pcdha11Q91Y19 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha11Q91Y19 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.22■■□□□ 1.79
Pcdha11Q91Y19 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdha11Q91Y19 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdha11Q91Y19 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.2■■□□□ 1.78
Pcdha11Q91Y19 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha11Q91Y19 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha11Q91Y19 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha11Q91Y19 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha11Q91Y19 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.18■■□□□ 1.78
Pcdha11Q91Y19 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Pcdha11Q91Y19 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdha11Q91Y19 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdha11Q91Y19 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdha11Q91Y19 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.15■■□□□ 1.78
Pcdha11Q91Y19 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.14■■□□□ 1.78
Pcdha11Q91Y19 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdha11Q91Y19 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdha11Q91Y19 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdha11Q91Y19 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdha11Q91Y19 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdha11Q91Y19 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdha11Q91Y19 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdha11Q91Y19 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdha11Q91Y19 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdha11Q91Y19 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdha11Q91Y19 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdha11Q91Y19 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdha11Q91Y19 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdha11Q91Y19 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.07■■□□□ 1.76
Pcdha11Q91Y19 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha11Q91Y19 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha11Q91Y19 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.03■■□□□ 1.76
Pcdha11Q91Y19 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Pcdha11Q91Y19 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.98■■□□□ 1.75
Pcdha11Q91Y19 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdha11Q91Y19 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdha11Q91Y19 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha11Q91Y19 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha11Q91Y19 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha11Q91Y19 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.95■■□□□ 1.74
Pcdha11Q91Y19 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdha11Q91Y19 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.93■■□□□ 1.74
Pcdha11Q91Y19 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha11Q91Y19 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha11Q91Y19 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha11Q91Y19 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdha11Q91Y19 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Pcdha11Q91Y19 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha11Q91Y19 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha11Q91Y19 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdha11Q91Y19 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Pcdha11Q91Y19 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdha11Q91Y19 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha11Q91Y19 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha11Q91Y19 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Pcdha11Q91Y19 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdha11Q91Y19 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdha11Q91Y19 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdha11Q91Y19 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdha11Q91Y19 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdha11Q91Y19 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcdha11Q91Y19 Zxda-201ENSMUST00000117281 2621 ntBASIC25.82■■□□□ 1.72
Pcdha11Q91Y19 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.81■■□□□ 1.72
Pcdha11Q91Y19 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.8■■□□□ 1.72
Pcdha11Q91Y19 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdha11Q91Y19 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdha11Q91Y19 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdha11Q91Y19 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha11Q91Y19 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdha11Q91Y19 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdha11Q91Y19 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.77■■□□□ 1.72
Pcdha11Q91Y19 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdha11Q91Y19 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.77■■□□□ 1.72
Pcdha11Q91Y19 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.76■■□□□ 1.71
Pcdha11Q91Y19 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdha11Q91Y19 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdha11Q91Y19 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdha11Q91Y19 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms