Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb2Q91Y00 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb2Q91Y00 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Pcdhb2Q91Y00 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb2Q91Y00 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb2Q91Y00 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Pcdhb2Q91Y00 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb2Q91Y00 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdhb2Q91Y00 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb2Q91Y00 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.35■■□□□ 1.81
Pcdhb2Q91Y00 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb2Q91Y00 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb2Q91Y00 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb2Q91Y00 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb2Q91Y00 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb2Q91Y00 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb2Q91Y00 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb2Q91Y00 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb2Q91Y00 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pcdhb2Q91Y00 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb2Q91Y00 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb2Q91Y00 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Pcdhb2Q91Y00 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.3■■□□□ 1.8
Pcdhb2Q91Y00 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb2Q91Y00 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.29■■□□□ 1.8
Pcdhb2Q91Y00 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.29■■□□□ 1.8
Pcdhb2Q91Y00 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.29■■□□□ 1.8
Pcdhb2Q91Y00 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb2Q91Y00 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb2Q91Y00 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb2Q91Y00 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.27■■□□□ 1.8
Pcdhb2Q91Y00 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Pcdhb2Q91Y00 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Pcdhb2Q91Y00 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhb2Q91Y00 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhb2Q91Y00 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhb2Q91Y00 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb2Q91Y00 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb2Q91Y00 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb2Q91Y00 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb2Q91Y00 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb2Q91Y00 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.21■■□□□ 1.79
Pcdhb2Q91Y00 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb2Q91Y00 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb2Q91Y00 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb2Q91Y00 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb2Q91Y00 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb2Q91Y00 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhb2Q91Y00 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhb2Q91Y00 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.18■■□□□ 1.78
Pcdhb2Q91Y00 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhb2Q91Y00 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb2Q91Y00 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.15■■□□□ 1.78
Pcdhb2Q91Y00 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb2Q91Y00 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb2Q91Y00 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb2Q91Y00 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb2Q91Y00 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
Pcdhb2Q91Y00 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.1■■□□□ 1.77
Pcdhb2Q91Y00 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb2Q91Y00 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb2Q91Y00 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb2Q91Y00 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Pcdhb2Q91Y00 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb2Q91Y00 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Pcdhb2Q91Y00 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Pcdhb2Q91Y00 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.05■■□□□ 1.76
Pcdhb2Q91Y00 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb2Q91Y00 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb2Q91Y00 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb2Q91Y00 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.04■■□□□ 1.76
Pcdhb2Q91Y00 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhb2Q91Y00 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb2Q91Y00 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhb2Q91Y00 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb2Q91Y00 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb2Q91Y00 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb2Q91Y00 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Pcdhb2Q91Y00 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb2Q91Y00 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb2Q91Y00 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Pcdhb2Q91Y00 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhb2Q91Y00 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhb2Q91Y00 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb2Q91Y00 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb2Q91Y00 Zxda-201ENSMUST00000117281 2621 ntBASIC25.92■■□□□ 1.74
Pcdhb2Q91Y00 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Pcdhb2Q91Y00 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb2Q91Y00 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb2Q91Y00 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb2Q91Y00 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb2Q91Y00 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb2Q91Y00 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb2Q91Y00 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.89■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms