Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
Ddx54Q8K4L0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC33.89■■■■□ 3.02
Ddx54Q8K4L0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ddx54Q8K4L0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.88■■■■□ 3.01
Ddx54Q8K4L0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Ddx54Q8K4L0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC33.86■■■■□ 3.01
Ddx54Q8K4L0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Ddx54Q8K4L0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC33.86■■■■□ 3.01
Ddx54Q8K4L0 Cap2-205ENSMUST00000225824 1634 ntBASIC33.86■■■■□ 3.01
Ddx54Q8K4L0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Ddx54Q8K4L0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ddx54Q8K4L0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Ddx54Q8K4L0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
Ddx54Q8K4L0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC33.82■■■■□ 3
Ddx54Q8K4L0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC33.82■■■■□ 3
Ddx54Q8K4L0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC33.81■■■■□ 3
Ddx54Q8K4L0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Ddx54Q8K4L0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
Ddx54Q8K4L0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Ddx54Q8K4L0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.74■■■□□ 2.99
Ddx54Q8K4L0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC33.73■■■□□ 2.99
Ddx54Q8K4L0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC33.72■■■□□ 2.99
Ddx54Q8K4L0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC33.7■■■□□ 2.99
Ddx54Q8K4L0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
Ddx54Q8K4L0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
Ddx54Q8K4L0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC33.67■■■□□ 2.98
Ddx54Q8K4L0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ddx54Q8K4L0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC33.64■■■□□ 2.98
Ddx54Q8K4L0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ddx54Q8K4L0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Ddx54Q8K4L0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ddx54Q8K4L0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC33.61■■■□□ 2.97
Ddx54Q8K4L0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC33.61■■■□□ 2.97
Ddx54Q8K4L0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Ddx54Q8K4L0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Ddx54Q8K4L0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
Ddx54Q8K4L0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.58■■■□□ 2.97
Ddx54Q8K4L0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.58■■■□□ 2.97
Ddx54Q8K4L0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC33.56■■■□□ 2.96
Ddx54Q8K4L0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Ddx54Q8K4L0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ddx54Q8K4L0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
Ddx54Q8K4L0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Ddx54Q8K4L0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
Ddx54Q8K4L0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ddx54Q8K4L0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ddx54Q8K4L0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.53■■■□□ 2.96
Ddx54Q8K4L0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.52■■■□□ 2.96
Ddx54Q8K4L0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC33.51■■■□□ 2.95
Ddx54Q8K4L0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC33.5■■■□□ 2.95
Ddx54Q8K4L0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ddx54Q8K4L0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ddx54Q8K4L0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ddx54Q8K4L0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ddx54Q8K4L0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Ddx54Q8K4L0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.48■■■□□ 2.95
Ddx54Q8K4L0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Ddx54Q8K4L0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ddx54Q8K4L0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ddx54Q8K4L0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Ddx54Q8K4L0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Ddx54Q8K4L0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Ddx54Q8K4L0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ddx54Q8K4L0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ddx54Q8K4L0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ddx54Q8K4L0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ddx54Q8K4L0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.4■■■□□ 2.94
Ddx54Q8K4L0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
Ddx54Q8K4L0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Ddx54Q8K4L0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Ddx54Q8K4L0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
Ddx54Q8K4L0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ddx54Q8K4L0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Ddx54Q8K4L0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Ddx54Q8K4L0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
Ddx54Q8K4L0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ddx54Q8K4L0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC33.34■■■□□ 2.93
Ddx54Q8K4L0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC33.34■■■□□ 2.93
Ddx54Q8K4L0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ddx54Q8K4L0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ddx54Q8K4L0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC33.31■■■□□ 2.92
Ddx54Q8K4L0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Ddx54Q8K4L0 Gm6311-201ENSMUST00000073790 878 ntBASIC33.3■■■□□ 2.92
Ddx54Q8K4L0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Ddx54Q8K4L0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC33.26■■■□□ 2.91
Ddx54Q8K4L0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Ddx54Q8K4L0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ddx54Q8K4L0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
Ddx54Q8K4L0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Ddx54Q8K4L0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33.22■■■□□ 2.91
Ddx54Q8K4L0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC33.22■■■□□ 2.91
Ddx54Q8K4L0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
Ddx54Q8K4L0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ddx54Q8K4L0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ddx54Q8K4L0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.9
Ddx54Q8K4L0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ddx54Q8K4L0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
Ddx54Q8K4L0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.18■■■□□ 2.9
Ddx54Q8K4L0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC33.17■■■□□ 2.9
Ddx54Q8K4L0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms