Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rbm28Q8CGC6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.34■■■□□ 2.29
Rbm28Q8CGC6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rbm28Q8CGC6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
Rbm28Q8CGC6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rbm28Q8CGC6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.31■■■□□ 2.28
Rbm28Q8CGC6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rbm28Q8CGC6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rbm28Q8CGC6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rbm28Q8CGC6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rbm28Q8CGC6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Rbm28Q8CGC6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.27■■■□□ 2.28
Rbm28Q8CGC6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.26■■■□□ 2.28
Rbm28Q8CGC6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
Rbm28Q8CGC6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Rbm28Q8CGC6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rbm28Q8CGC6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rbm28Q8CGC6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rbm28Q8CGC6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Rbm28Q8CGC6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm28Q8CGC6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm28Q8CGC6 Gm8503-201ENSMUST00000118131 455 ntBASIC29.18■■■□□ 2.26
Rbm28Q8CGC6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rbm28Q8CGC6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
Rbm28Q8CGC6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Rbm28Q8CGC6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rbm28Q8CGC6 Gm6821-201ENSMUST00000107540 542 ntBASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rbm28Q8CGC6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rbm28Q8CGC6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rbm28Q8CGC6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rbm28Q8CGC6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.11■■■□□ 2.25
Rbm28Q8CGC6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rbm28Q8CGC6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.1■■■□□ 2.25
Rbm28Q8CGC6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rbm28Q8CGC6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rbm28Q8CGC6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rbm28Q8CGC6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Rbm28Q8CGC6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rbm28Q8CGC6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Rbm28Q8CGC6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Rbm28Q8CGC6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.02■■■□□ 2.24
Rbm28Q8CGC6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
Rbm28Q8CGC6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
Rbm28Q8CGC6 Gm6345-201ENSMUST00000180378 1691 ntBASIC29■■■□□ 2.23
Rbm28Q8CGC6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rbm28Q8CGC6 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.95■■■□□ 2.23
Rbm28Q8CGC6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rbm28Q8CGC6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rbm28Q8CGC6 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.92■■■□□ 2.22
Rbm28Q8CGC6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Rbm28Q8CGC6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rbm28Q8CGC6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rbm28Q8CGC6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Nkain2-201ENSMUST00000092602 558 ntBASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rbm28Q8CGC6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Rbm28Q8CGC6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.84■■■□□ 2.21
Rbm28Q8CGC6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.84■■■□□ 2.21
Rbm28Q8CGC6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms