Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Trim52Q8CDV4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Trim52Q8CDV4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.69■■■□□ 2.66
Trim52Q8CDV4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim52Q8CDV4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim52Q8CDV4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim52Q8CDV4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim52Q8CDV4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Trim52Q8CDV4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trim52Q8CDV4 Gm8503-201ENSMUST00000118131 455 ntBASIC31.65■■■□□ 2.66
Trim52Q8CDV4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Trim52Q8CDV4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Trim52Q8CDV4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Trim52Q8CDV4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trim52Q8CDV4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.6■■■□□ 2.65
Trim52Q8CDV4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim52Q8CDV4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim52Q8CDV4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
Trim52Q8CDV4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trim52Q8CDV4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Trim52Q8CDV4 Gm6821-201ENSMUST00000107540 542 ntBASIC31.55■■■□□ 2.64
Trim52Q8CDV4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
Trim52Q8CDV4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.54■■■□□ 2.64
Trim52Q8CDV4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim52Q8CDV4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim52Q8CDV4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim52Q8CDV4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Trim52Q8CDV4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.5■■■□□ 2.63
Trim52Q8CDV4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim52Q8CDV4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Trim52Q8CDV4 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.49■■■□□ 2.63
Trim52Q8CDV4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Trim52Q8CDV4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim52Q8CDV4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim52Q8CDV4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim52Q8CDV4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim52Q8CDV4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim52Q8CDV4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Trim52Q8CDV4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trim52Q8CDV4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.45■■■□□ 2.63
Trim52Q8CDV4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim52Q8CDV4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim52Q8CDV4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim52Q8CDV4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trim52Q8CDV4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Trim52Q8CDV4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Trim52Q8CDV4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.38■■■□□ 2.61
Trim52Q8CDV4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.37■■■□□ 2.61
Trim52Q8CDV4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Trim52Q8CDV4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trim52Q8CDV4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trim52Q8CDV4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trim52Q8CDV4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trim52Q8CDV4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trim52Q8CDV4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
Trim52Q8CDV4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.31■■■□□ 2.6
Trim52Q8CDV4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
Trim52Q8CDV4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Trim52Q8CDV4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.29■■■□□ 2.6
Trim52Q8CDV4 Nkain2-201ENSMUST00000092602 558 ntBASIC31.29■■■□□ 2.6
Trim52Q8CDV4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim52Q8CDV4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trim52Q8CDV4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim52Q8CDV4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trim52Q8CDV4 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.26■■■□□ 2.59
Trim52Q8CDV4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.26■■■□□ 2.59
Trim52Q8CDV4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
Trim52Q8CDV4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Trim52Q8CDV4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.25■■■□□ 2.59
Trim52Q8CDV4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Trim52Q8CDV4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim52Q8CDV4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Trim52Q8CDV4 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.23■■■□□ 2.59
Trim52Q8CDV4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trim52Q8CDV4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.22■■■□□ 2.59
Trim52Q8CDV4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Trim52Q8CDV4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Trim52Q8CDV4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Trim52Q8CDV4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.2■■■□□ 2.59
Trim52Q8CDV4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Trim52Q8CDV4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.19■■■□□ 2.58
Trim52Q8CDV4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trim52Q8CDV4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim52Q8CDV4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Trim52Q8CDV4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim52Q8CDV4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Trim52Q8CDV4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim52Q8CDV4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
Trim52Q8CDV4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.07■■■□□ 2.56
Trim52Q8CDV4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Trim52Q8CDV4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Trim52Q8CDV4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Trim52Q8CDV4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Trim52Q8CDV4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Trim52Q8CDV4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.04■■■□□ 2.56
Trim52Q8CDV4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Trim52Q8CDV4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Trim52Q8CDV4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.03■■■□□ 2.56
Trim52Q8CDV4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Trim52Q8CDV4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms