Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Eri3Q8C460 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Eri3Q8C460 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Eri3Q8C460 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Eri3Q8C460 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Eri3Q8C460 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Eri3Q8C460 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Eri3Q8C460 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Eri3Q8C460 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.55■■□□□ 1.36
Eri3Q8C460 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Eri3Q8C460 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Eri3Q8C460 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Eri3Q8C460 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Eri3Q8C460 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Eri3Q8C460 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.53■■□□□ 1.36
Eri3Q8C460 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.53■■□□□ 1.36
Eri3Q8C460 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Eri3Q8C460 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Eri3Q8C460 Gm9397-201ENSMUST00000200125 605 ntBASIC23.52■■□□□ 1.36
Eri3Q8C460 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Eri3Q8C460 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Eri3Q8C460 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Eri3Q8C460 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Eri3Q8C460 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Eri3Q8C460 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.5■■□□□ 1.35
Eri3Q8C460 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.5■■□□□ 1.35
Eri3Q8C460 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Eri3Q8C460 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.5■■□□□ 1.35
Eri3Q8C460 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Eri3Q8C460 Gm45855-201ENSMUST00000212546 880 ntBASIC23.49■■□□□ 1.35
Eri3Q8C460 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.49■■□□□ 1.35
Eri3Q8C460 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Eri3Q8C460 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.47■■□□□ 1.35
Eri3Q8C460 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Eri3Q8C460 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Eri3Q8C460 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Eri3Q8C460 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Eri3Q8C460 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
Eri3Q8C460 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.43■■□□□ 1.34
Eri3Q8C460 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Eri3Q8C460 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.42■■□□□ 1.34
Eri3Q8C460 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.41■■□□□ 1.34
Eri3Q8C460 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.41■■□□□ 1.34
Eri3Q8C460 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Eri3Q8C460 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Eri3Q8C460 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Eri3Q8C460 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Eri3Q8C460 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Eri3Q8C460 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Eri3Q8C460 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Eri3Q8C460 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Eri3Q8C460 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Eri3Q8C460 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Eri3Q8C460 Gm24970-201ENSMUST00000175582 82 ntBASIC23.37■■□□□ 1.33
Eri3Q8C460 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Eri3Q8C460 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Eri3Q8C460 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Eri3Q8C460 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.35■■□□□ 1.33
Eri3Q8C460 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.35■■□□□ 1.33
Eri3Q8C460 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Eri3Q8C460 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Eri3Q8C460 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.34■■□□□ 1.33
Eri3Q8C460 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.34■■□□□ 1.33
Eri3Q8C460 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Eri3Q8C460 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Eri3Q8C460 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Eri3Q8C460 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Eri3Q8C460 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.31■■□□□ 1.32
Eri3Q8C460 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.31■■□□□ 1.32
Eri3Q8C460 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Eri3Q8C460 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Eri3Q8C460 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.3■■□□□ 1.32
Eri3Q8C460 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Eri3Q8C460 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.3■■□□□ 1.32
Eri3Q8C460 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.29■■□□□ 1.32
Eri3Q8C460 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Eri3Q8C460 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Eri3Q8C460 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.28■■□□□ 1.32
Eri3Q8C460 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Eri3Q8C460 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Eri3Q8C460 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Eri3Q8C460 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Eri3Q8C460 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Eri3Q8C460 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Eri3Q8C460 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Eri3Q8C460 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Eri3Q8C460 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Eri3Q8C460 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.24■■□□□ 1.31
Eri3Q8C460 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Eri3Q8C460 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Eri3Q8C460 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Eri3Q8C460 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Eri3Q8C460 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Eri3Q8C460 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Eri3Q8C460 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Eri3Q8C460 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Eri3Q8C460 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Eri3Q8C460 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Eri3Q8C460 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Eri3Q8C460 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms