Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smg1Q8BKX6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Smg1Q8BKX6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smg1Q8BKX6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smg1Q8BKX6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smg1Q8BKX6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Smg1Q8BKX6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smg1Q8BKX6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smg1Q8BKX6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smg1Q8BKX6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.71■■□□□ 1.07
Smg1Q8BKX6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.7■■□□□ 1.06
Smg1Q8BKX6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smg1Q8BKX6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smg1Q8BKX6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smg1Q8BKX6 Nkain2-201ENSMUST00000092602 558 ntBASIC21.67■■□□□ 1.06
Smg1Q8BKX6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smg1Q8BKX6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smg1Q8BKX6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smg1Q8BKX6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.66■■□□□ 1.06
Smg1Q8BKX6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smg1Q8BKX6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Smg1Q8BKX6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Smg1Q8BKX6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smg1Q8BKX6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smg1Q8BKX6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Smg1Q8BKX6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Smg1Q8BKX6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smg1Q8BKX6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smg1Q8BKX6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smg1Q8BKX6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smg1Q8BKX6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smg1Q8BKX6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smg1Q8BKX6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.6■■□□□ 1.05
Smg1Q8BKX6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smg1Q8BKX6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smg1Q8BKX6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.59■■□□□ 1.05
Smg1Q8BKX6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Smg1Q8BKX6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smg1Q8BKX6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.59■■□□□ 1.05
Smg1Q8BKX6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smg1Q8BKX6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smg1Q8BKX6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smg1Q8BKX6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smg1Q8BKX6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smg1Q8BKX6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Smg1Q8BKX6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Smg1Q8BKX6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smg1Q8BKX6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.49■■□□□ 1.03
Smg1Q8BKX6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Smg1Q8BKX6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Smg1Q8BKX6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.47■■□□□ 1.03
Smg1Q8BKX6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smg1Q8BKX6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smg1Q8BKX6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Smg1Q8BKX6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smg1Q8BKX6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smg1Q8BKX6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smg1Q8BKX6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.44■■□□□ 1.02
Smg1Q8BKX6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smg1Q8BKX6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.43■■□□□ 1.02
Smg1Q8BKX6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smg1Q8BKX6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.42■■□□□ 1.02
Smg1Q8BKX6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smg1Q8BKX6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smg1Q8BKX6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smg1Q8BKX6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smg1Q8BKX6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smg1Q8BKX6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smg1Q8BKX6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smg1Q8BKX6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smg1Q8BKX6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smg1Q8BKX6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.39■■□□□ 1.01
Smg1Q8BKX6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Smg1Q8BKX6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.38■■□□□ 1.01
Smg1Q8BKX6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smg1Q8BKX6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smg1Q8BKX6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smg1Q8BKX6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smg1Q8BKX6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smg1Q8BKX6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smg1Q8BKX6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.36■■□□□ 1.01
Smg1Q8BKX6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smg1Q8BKX6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Smg1Q8BKX6 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.34■■□□□ 1.01
Smg1Q8BKX6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smg1Q8BKX6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smg1Q8BKX6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smg1Q8BKX6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smg1Q8BKX6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smg1Q8BKX6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.32■■□□□ 1
Smg1Q8BKX6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smg1Q8BKX6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smg1Q8BKX6 Gm22567-201ENSMUST00000175542 342 ntBASIC21.31■■□□□ 1
Smg1Q8BKX6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.31■■□□□ 1
Smg1Q8BKX6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms