Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.89■■□□□ 1.42
Vrk1Q80X41 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vrk1Q80X41 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vrk1Q80X41 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Vrk1Q80X41 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Vrk1Q80X41 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.85■■□□□ 1.41
Vrk1Q80X41 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.85■■□□□ 1.41
Vrk1Q80X41 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Vrk1Q80X41 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vrk1Q80X41 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.83■■□□□ 1.41
Vrk1Q80X41 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vrk1Q80X41 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.82■■□□□ 1.4
Vrk1Q80X41 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.82■■□□□ 1.4
Vrk1Q80X41 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vrk1Q80X41 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.81■■□□□ 1.4
Vrk1Q80X41 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Vrk1Q80X41 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.8■■□□□ 1.4
Vrk1Q80X41 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vrk1Q80X41 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vrk1Q80X41 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vrk1Q80X41 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vrk1Q80X41 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vrk1Q80X41 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vrk1Q80X41 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vrk1Q80X41 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vrk1Q80X41 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vrk1Q80X41 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.75■■□□□ 1.39
Vrk1Q80X41 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Vrk1Q80X41 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vrk1Q80X41 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Vrk1Q80X41 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.73■■□□□ 1.39
Vrk1Q80X41 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vrk1Q80X41 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vrk1Q80X41 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vrk1Q80X41 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Vrk1Q80X41 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vrk1Q80X41 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.7■■□□□ 1.38
Vrk1Q80X41 Nkain2-201ENSMUST00000092602 558 ntBASIC23.7■■□□□ 1.38
Vrk1Q80X41 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vrk1Q80X41 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vrk1Q80X41 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Vrk1Q80X41 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vrk1Q80X41 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Vrk1Q80X41 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vrk1Q80X41 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vrk1Q80X41 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Vrk1Q80X41 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vrk1Q80X41 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vrk1Q80X41 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vrk1Q80X41 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vrk1Q80X41 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vrk1Q80X41 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Vrk1Q80X41 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vrk1Q80X41 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vrk1Q80X41 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vrk1Q80X41 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vrk1Q80X41 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.62■■□□□ 1.37
Vrk1Q80X41 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vrk1Q80X41 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vrk1Q80X41 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vrk1Q80X41 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vrk1Q80X41 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Vrk1Q80X41 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vrk1Q80X41 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vrk1Q80X41 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.58■■□□□ 1.37
Vrk1Q80X41 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vrk1Q80X41 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.57■■□□□ 1.36
Vrk1Q80X41 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vrk1Q80X41 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Vrk1Q80X41 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Vrk1Q80X41 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vrk1Q80X41 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vrk1Q80X41 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vrk1Q80X41 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.54■■□□□ 1.36
Vrk1Q80X41 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Vrk1Q80X41 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Vrk1Q80X41 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Vrk1Q80X41 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vrk1Q80X41 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.5■■□□□ 1.35
Vrk1Q80X41 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vrk1Q80X41 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.49■■□□□ 1.35
Vrk1Q80X41 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.48■■□□□ 1.35
Vrk1Q80X41 Gm7432-201ENSMUST00000210343 879 ntBASIC23.48■■□□□ 1.35
Vrk1Q80X41 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Vrk1Q80X41 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vrk1Q80X41 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.47■■□□□ 1.35
Vrk1Q80X41 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
Vrk1Q80X41 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vrk1Q80X41 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Vrk1Q80X41 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vrk1Q80X41 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.44■■□□□ 1.34
Vrk1Q80X41 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vrk1Q80X41 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Vrk1Q80X41 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vrk1Q80X41 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Vrk1Q80X41 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vrk1Q80X41 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Vrk1Q80X41 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Vrk1Q80X41 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.41■■□□□ 1.34
Vrk1Q80X41 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms