Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Srsf1Q6PDM2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Srsf1Q6PDM2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Srsf1Q6PDM2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Srsf1Q6PDM2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Srsf1Q6PDM2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.02■■□□□ 1.12
Srsf1Q6PDM2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Srsf1Q6PDM2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Srsf1Q6PDM2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Srsf1Q6PDM2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Srsf1Q6PDM2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Srsf1Q6PDM2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Srsf1Q6PDM2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Srsf1Q6PDM2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Srsf1Q6PDM2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.93■■□□□ 1.1
Srsf1Q6PDM2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.92■■□□□ 1.1
Srsf1Q6PDM2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Srsf1Q6PDM2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Srsf1Q6PDM2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Srsf1Q6PDM2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Srsf1Q6PDM2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.87■■□□□ 1.09
Srsf1Q6PDM2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Srsf1Q6PDM2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Srsf1Q6PDM2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Srsf1Q6PDM2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srsf1Q6PDM2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srsf1Q6PDM2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.78■■□□□ 1.08
Srsf1Q6PDM2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Srsf1Q6PDM2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Srsf1Q6PDM2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Srsf1Q6PDM2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Srsf1Q6PDM2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Srsf1Q6PDM2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Srsf1Q6PDM2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srsf1Q6PDM2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Srsf1Q6PDM2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.67■■□□□ 1.06
Srsf1Q6PDM2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Srsf1Q6PDM2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Srsf1Q6PDM2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srsf1Q6PDM2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Srsf1Q6PDM2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms