Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Atg9aQ68FE2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.7■■■□□ 2.51
Atg9aQ68FE2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Atg9aQ68FE2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.69■■■□□ 2.5
Atg9aQ68FE2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Atg9aQ68FE2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Atg9aQ68FE2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Atg9aQ68FE2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Atg9aQ68FE2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Atg9aQ68FE2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.68■■■□□ 2.5
Atg9aQ68FE2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.67■■■□□ 2.5
Atg9aQ68FE2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Atg9aQ68FE2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Atg9aQ68FE2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.66■■■□□ 2.5
Atg9aQ68FE2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Atg9aQ68FE2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Atg9aQ68FE2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Atg9aQ68FE2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Atg9aQ68FE2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Atg9aQ68FE2 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.59■■■□□ 2.49
Atg9aQ68FE2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Atg9aQ68FE2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Atg9aQ68FE2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.49
Atg9aQ68FE2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atg9aQ68FE2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atg9aQ68FE2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atg9aQ68FE2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Atg9aQ68FE2 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.55■■■□□ 2.48
Atg9aQ68FE2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Atg9aQ68FE2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Atg9aQ68FE2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Atg9aQ68FE2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atg9aQ68FE2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Atg9aQ68FE2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Atg9aQ68FE2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atg9aQ68FE2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Atg9aQ68FE2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Atg9aQ68FE2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Atg9aQ68FE2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atg9aQ68FE2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Atg9aQ68FE2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Atg9aQ68FE2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Atg9aQ68FE2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Atg9aQ68FE2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Atg9aQ68FE2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Atg9aQ68FE2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Atg9aQ68FE2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.38■■■□□ 2.45
Atg9aQ68FE2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
Atg9aQ68FE2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Atg9aQ68FE2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Atg9aQ68FE2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.36■■■□□ 2.45
Atg9aQ68FE2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Atg9aQ68FE2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Atg9aQ68FE2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Atg9aQ68FE2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Atg9aQ68FE2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atg9aQ68FE2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atg9aQ68FE2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.31■■■□□ 2.44
Atg9aQ68FE2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.3■■■□□ 2.44
Atg9aQ68FE2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Atg9aQ68FE2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Atg9aQ68FE2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Atg9aQ68FE2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.28■■■□□ 2.44
Atg9aQ68FE2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Atg9aQ68FE2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Atg9aQ68FE2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.25■■■□□ 2.43
Atg9aQ68FE2 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.24■■■□□ 2.43
Atg9aQ68FE2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
Atg9aQ68FE2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg9aQ68FE2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg9aQ68FE2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg9aQ68FE2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Atg9aQ68FE2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.21■■■□□ 2.43
Atg9aQ68FE2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Atg9aQ68FE2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Atg9aQ68FE2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Atg9aQ68FE2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
Atg9aQ68FE2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Atg9aQ68FE2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Atg9aQ68FE2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Atg9aQ68FE2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Atg9aQ68FE2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Atg9aQ68FE2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Atg9aQ68FE2 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.13■■■□□ 2.41
Atg9aQ68FE2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Atg9aQ68FE2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.12■■■□□ 2.41
Atg9aQ68FE2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.12■■■□□ 2.41
Atg9aQ68FE2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Atg9aQ68FE2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Atg9aQ68FE2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Atg9aQ68FE2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.1■■■□□ 2.41
Atg9aQ68FE2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Atg9aQ68FE2 Gm8503-201ENSMUST00000118131 455 ntBASIC30.08■■■□□ 2.41
Atg9aQ68FE2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Atg9aQ68FE2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Atg9aQ68FE2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Atg9aQ68FE2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Atg9aQ68FE2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Atg9aQ68FE2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Atg9aQ68FE2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms