Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Col12a1Q60847 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.75■■□□□ 1.71
Col12a1Q60847 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.75■■□□□ 1.71
Col12a1Q60847 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Col12a1Q60847 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col12a1Q60847 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col12a1Q60847 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.71■■□□□ 1.71
Col12a1Q60847 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Col12a1Q60847 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Col12a1Q60847 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
Col12a1Q60847 Gm15039-201ENSMUST00000118914 875 ntBASIC25.67■■□□□ 1.7
Col12a1Q60847 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Col12a1Q60847 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col12a1Q60847 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Col12a1Q60847 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col12a1Q60847 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Col12a1Q60847 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col12a1Q60847 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Col12a1Q60847 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col12a1Q60847 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col12a1Q60847 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col12a1Q60847 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col12a1Q60847 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col12a1Q60847 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Col12a1Q60847 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col12a1Q60847 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col12a1Q60847 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col12a1Q60847 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Col12a1Q60847 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col12a1Q60847 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col12a1Q60847 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col12a1Q60847 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
Col12a1Q60847 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.53■■□□□ 1.68
Col12a1Q60847 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Col12a1Q60847 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col12a1Q60847 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col12a1Q60847 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Col12a1Q60847 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col12a1Q60847 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col12a1Q60847 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.48■■□□□ 1.67
Col12a1Q60847 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.48■■□□□ 1.67
Col12a1Q60847 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col12a1Q60847 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col12a1Q60847 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col12a1Q60847 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.45■■□□□ 1.66
Col12a1Q60847 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Col12a1Q60847 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Col12a1Q60847 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.44■■□□□ 1.66
Col12a1Q60847 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.44■■□□□ 1.66
Col12a1Q60847 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col12a1Q60847 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col12a1Q60847 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Col12a1Q60847 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.41■■□□□ 1.66
Col12a1Q60847 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col12a1Q60847 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.38■■□□□ 1.65
Col12a1Q60847 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col12a1Q60847 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col12a1Q60847 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col12a1Q60847 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col12a1Q60847 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Col12a1Q60847 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col12a1Q60847 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col12a1Q60847 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Col12a1Q60847 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col12a1Q60847 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col12a1Q60847 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col12a1Q60847 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col12a1Q60847 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.32■■□□□ 1.64
Col12a1Q60847 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.31■■□□□ 1.64
Col12a1Q60847 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col12a1Q60847 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col12a1Q60847 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
Col12a1Q60847 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.28■■□□□ 1.64
Col12a1Q60847 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col12a1Q60847 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col12a1Q60847 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Col12a1Q60847 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Col12a1Q60847 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col12a1Q60847 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col12a1Q60847 Gm6311-201ENSMUST00000073790 878 ntBASIC25.27■■□□□ 1.64
Col12a1Q60847 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col12a1Q60847 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Col12a1Q60847 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col12a1Q60847 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.26■■□□□ 1.63
Col12a1Q60847 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Col12a1Q60847 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.26■■□□□ 1.63
Col12a1Q60847 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.25■■□□□ 1.63
Col12a1Q60847 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.25■■□□□ 1.63
Col12a1Q60847 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col12a1Q60847 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Col12a1Q60847 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col12a1Q60847 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col12a1Q60847 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col12a1Q60847 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col12a1Q60847 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
Col12a1Q60847 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col12a1Q60847 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.23■■□□□ 1.63
Col12a1Q60847 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.23■■□□□ 1.63
Col12a1Q60847 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col12a1Q60847 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms