Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf43Q5NCP0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.62■■□□□ 1.69
Rnf43Q5NCP0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rnf43Q5NCP0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Rnf43Q5NCP0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf43Q5NCP0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf43Q5NCP0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.58■■□□□ 1.69
Rnf43Q5NCP0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.57■■□□□ 1.68
Rnf43Q5NCP0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf43Q5NCP0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf43Q5NCP0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf43Q5NCP0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf43Q5NCP0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
Rnf43Q5NCP0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.49■■□□□ 1.67
Rnf43Q5NCP0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf43Q5NCP0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf43Q5NCP0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf43Q5NCP0 Gm7432-201ENSMUST00000210343 879 ntBASIC25.45■■□□□ 1.66
Rnf43Q5NCP0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Rnf43Q5NCP0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf43Q5NCP0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf43Q5NCP0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Rnf43Q5NCP0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf43Q5NCP0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf43Q5NCP0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf43Q5NCP0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf43Q5NCP0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf43Q5NCP0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.31■■□□□ 1.64
Rnf43Q5NCP0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf43Q5NCP0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf43Q5NCP0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rnf43Q5NCP0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.27■■□□□ 1.64
Rnf43Q5NCP0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf43Q5NCP0 Gm11599-201ENSMUST00000118720 878 ntBASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf43Q5NCP0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.24■■□□□ 1.63
Rnf43Q5NCP0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Rnf43Q5NCP0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf43Q5NCP0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf43Q5NCP0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf43Q5NCP0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.15■■□□□ 1.62
Rnf43Q5NCP0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf43Q5NCP0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 221.1 ms