Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.51■■□□□ 1.03
Gm12253Q5NC48 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Zxda-201ENSMUST00000117281 2621 ntBASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm12253Q5NC48 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm12253Q5NC48 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Gm12253Q5NC48 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm12253Q5NC48 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Gm12253Q5NC48 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm12253Q5NC48 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.4■■□□□ 1.02
Gm12253Q5NC48 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm12253Q5NC48 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.33■■□□□ 1
Gm12253Q5NC48 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm12253Q5NC48 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm12253Q5NC48 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.3■■□□□ 1
Gm12253Q5NC48 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm12253Q5NC48 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm12253Q5NC48 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm12253Q5NC48 Gm8503-201ENSMUST00000118131 455 ntBASIC21.28■■□□□ 1
Gm12253Q5NC48 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm12253Q5NC48 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm12253Q5NC48 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.27■■□□□ 1
Gm12253Q5NC48 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Gm6821-201ENSMUST00000107540 542 ntBASIC21.25■□□□□ 0.99
Gm12253Q5NC48 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm12253Q5NC48 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm12253Q5NC48 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Gm12253Q5NC48 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm12253Q5NC48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm12253Q5NC48 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.16■□□□□ 0.98
Gm12253Q5NC48 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm12253Q5NC48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm12253Q5NC48 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm12253Q5NC48 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm12253Q5NC48 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms