Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usp9xP70398 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.41■■□□□ 1.02
Usp9xP70398 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp9xP70398 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Usp9xP70398 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Usp9xP70398 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp9xP70398 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp9xP70398 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp9xP70398 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp9xP70398 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Usp9xP70398 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp9xP70398 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Usp9xP70398 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.29■■□□□ 1
Usp9xP70398 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.29■■□□□ 1
Usp9xP70398 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp9xP70398 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp9xP70398 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp9xP70398 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Usp9xP70398 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp9xP70398 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp9xP70398 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp9xP70398 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Usp9xP70398 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp9xP70398 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp9xP70398 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp9xP70398 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp9xP70398 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp9xP70398 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp9xP70398 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp9xP70398 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp9xP70398 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp9xP70398 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp9xP70398 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp9xP70398 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp9xP70398 Gm15039-201ENSMUST00000118914 875 ntBASIC21.17■□□□□ 0.98
Usp9xP70398 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp9xP70398 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp9xP70398 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp9xP70398 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp9xP70398 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Usp9xP70398 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp9xP70398 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp9xP70398 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp9xP70398 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.13■□□□□ 0.97
Usp9xP70398 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp9xP70398 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp9xP70398 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp9xP70398 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp9xP70398 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp9xP70398 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
Usp9xP70398 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp9xP70398 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp9xP70398 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Usp9xP70398 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp9xP70398 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp9xP70398 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp9xP70398 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp9xP70398 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.08■□□□□ 0.97
Usp9xP70398 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp9xP70398 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp9xP70398 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Usp9xP70398 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp9xP70398 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.05■□□□□ 0.96
Usp9xP70398 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Usp9xP70398 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp9xP70398 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp9xP70398 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.05■□□□□ 0.96
Usp9xP70398 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp9xP70398 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp9xP70398 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp9xP70398 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp9xP70398 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.04■□□□□ 0.96
Usp9xP70398 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp9xP70398 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp9xP70398 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.03■□□□□ 0.96
Usp9xP70398 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.02■□□□□ 0.96
Usp9xP70398 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp9xP70398 Gm6311-201ENSMUST00000073790 878 ntBASIC21.02■□□□□ 0.96
Usp9xP70398 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp9xP70398 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp9xP70398 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp9xP70398 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp9xP70398 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp9xP70398 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp9xP70398 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp9xP70398 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21■□□□□ 0.95
Usp9xP70398 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp9xP70398 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Usp9xP70398 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp9xP70398 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21■□□□□ 0.95
Usp9xP70398 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21■□□□□ 0.95
Usp9xP70398 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp9xP70398 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp9xP70398 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Usp9xP70398 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp9xP70398 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp9xP70398 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp9xP70398 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.97■□□□□ 0.95
Usp9xP70398 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp9xP70398 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms