Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01804 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.4■■□□□ 1.02
P01804 Gm24970-201ENSMUST00000175582 82 ntBASIC21.4■■□□□ 1.02
P01804 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P01804 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.39■■□□□ 1.01
P01804 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P01804 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P01804 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
P01804 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
P01804 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01804 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.37■■□□□ 1.01
P01804 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
P01804 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.36■■□□□ 1.01
P01804 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
P01804 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
P01804 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
P01804 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
P01804 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P01804 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
P01804 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.31■■□□□ 1
P01804 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01804 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.29■■□□□ 1
P01804 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01804 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
P01804 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
P01804 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.28■■□□□ 1
P01804 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.28■■□□□ 1
P01804 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
P01804 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.28■■□□□ 1
P01804 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P01804 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P01804 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
P01804 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P01804 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P01804 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
P01804 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
P01804 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P01804 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P01804 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P01804 Zxda-201ENSMUST00000117281 2621 ntBASIC21.24■□□□□ 0.99
P01804 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.23■□□□□ 0.99
P01804 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01804 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.22■□□□□ 0.99
P01804 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01804 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.22■□□□□ 0.99
P01804 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
P01804 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.19■□□□□ 0.98
P01804 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P01804 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
P01804 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P01804 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01804 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.17■□□□□ 0.98
P01804 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01804 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.17■□□□□ 0.98
P01804 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P01804 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.16■□□□□ 0.98
P01804 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.15■□□□□ 0.98
P01804 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P01804 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01804 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.12■□□□□ 0.97
P01804 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.12■□□□□ 0.97
P01804 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P01804 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01804 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01804 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
P01804 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01804 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.09■□□□□ 0.97
P01804 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P01804 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P01804 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P01804 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
P01804 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.08■□□□□ 0.96
P01804 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01804 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01804 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
P01804 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.07■□□□□ 0.96
P01804 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
P01804 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01804 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
P01804 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.06■□□□□ 0.96
P01804 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.06■□□□□ 0.96
P01804 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.05■□□□□ 0.96
P01804 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01804 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms