Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.2■■□□□ 1.78
Syn1O88935 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.19■■□□□ 1.78
Syn1O88935 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
Syn1O88935 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Syn1O88935 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.15■■□□□ 1.78
Syn1O88935 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Syn1O88935 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Syn1O88935 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Syn1O88935 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Syn1O88935 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Syn1O88935 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Syn1O88935 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Syn1O88935 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Syn1O88935 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Syn1O88935 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
Syn1O88935 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Syn1O88935 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Syn1O88935 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Syn1O88935 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.09■■□□□ 1.77
Syn1O88935 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Syn1O88935 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Syn1O88935 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Syn1O88935 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Syn1O88935 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Syn1O88935 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Syn1O88935 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Syn1O88935 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.03■■□□□ 1.76
Syn1O88935 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Syn1O88935 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Syn1O88935 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26■■□□□ 1.75
Syn1O88935 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26■■□□□ 1.75
Syn1O88935 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Syn1O88935 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Syn1O88935 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Syn1O88935 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Syn1O88935 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Syn1O88935 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Syn1O88935 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Syn1O88935 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Syn1O88935 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Syn1O88935 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Syn1O88935 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Syn1O88935 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Syn1O88935 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Syn1O88935 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Syn1O88935 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Syn1O88935 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Syn1O88935 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Syn1O88935 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.86■■□□□ 1.73
Syn1O88935 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Syn1O88935 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Syn1O88935 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Syn1O88935 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.85■■□□□ 1.73
Syn1O88935 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Syn1O88935 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Syn1O88935 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Syn1O88935 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Syn1O88935 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
Syn1O88935 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
Syn1O88935 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Syn1O88935 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.82■■□□□ 1.72
Syn1O88935 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.82■■□□□ 1.72
Syn1O88935 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Syn1O88935 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Syn1O88935 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Syn1O88935 Gm15039-201ENSMUST00000118914 875 ntBASIC25.8■■□□□ 1.72
Syn1O88935 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Syn1O88935 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Syn1O88935 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.77■■□□□ 1.72
Syn1O88935 Gm6311-201ENSMUST00000073790 878 ntBASIC25.77■■□□□ 1.72
Syn1O88935 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Syn1O88935 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Syn1O88935 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.77■■□□□ 1.72
Syn1O88935 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Syn1O88935 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Syn1O88935 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Syn1O88935 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.74■■□□□ 1.71
Syn1O88935 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Syn1O88935 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.73■■□□□ 1.71
Syn1O88935 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Syn1O88935 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Syn1O88935 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Syn1O88935 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Syn1O88935 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Syn1O88935 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Syn1O88935 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.7■■□□□ 1.7
Syn1O88935 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Syn1O88935 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Syn1O88935 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Syn1O88935 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.69■■□□□ 1.7
Syn1O88935 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.69■■□□□ 1.7
Syn1O88935 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Syn1O88935 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.69■■□□□ 1.7
Syn1O88935 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Syn1O88935 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Syn1O88935 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Syn1O88935 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Syn1O88935 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Syn1O88935 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Syn1O88935 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms