Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cx3cl1O35188 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cx3cl1O35188 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cx3cl1O35188 Gm24970-201ENSMUST00000175582 82 ntBASIC23.2■■□□□ 1.3
Cx3cl1O35188 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.2■■□□□ 1.3
Cx3cl1O35188 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.19■■□□□ 1.3
Cx3cl1O35188 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cx3cl1O35188 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cx3cl1O35188 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Cx3cl1O35188 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.18■■□□□ 1.3
Cx3cl1O35188 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cx3cl1O35188 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cx3cl1O35188 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cx3cl1O35188 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cx3cl1O35188 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.15■■□□□ 1.3
Cx3cl1O35188 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cx3cl1O35188 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cx3cl1O35188 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cx3cl1O35188 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cx3cl1O35188 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cx3cl1O35188 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cx3cl1O35188 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cx3cl1O35188 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cx3cl1O35188 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Cx3cl1O35188 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cx3cl1O35188 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Cx3cl1O35188 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cx3cl1O35188 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cx3cl1O35188 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cx3cl1O35188 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Cx3cl1O35188 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Cx3cl1O35188 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.08■■□□□ 1.29
Cx3cl1O35188 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Cx3cl1O35188 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cx3cl1O35188 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cx3cl1O35188 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.06■■□□□ 1.28
Cx3cl1O35188 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.06■■□□□ 1.28
Cx3cl1O35188 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Cx3cl1O35188 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cx3cl1O35188 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cx3cl1O35188 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cx3cl1O35188 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.04■■□□□ 1.28
Cx3cl1O35188 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cx3cl1O35188 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cx3cl1O35188 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Cx3cl1O35188 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.02■■□□□ 1.28
Cx3cl1O35188 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Cx3cl1O35188 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cx3cl1O35188 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.01■■□□□ 1.27
Cx3cl1O35188 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.01■■□□□ 1.27
Cx3cl1O35188 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cx3cl1O35188 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cx3cl1O35188 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cx3cl1O35188 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cx3cl1O35188 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cx3cl1O35188 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cx3cl1O35188 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cx3cl1O35188 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Cx3cl1O35188 Zxda-201ENSMUST00000117281 2621 ntBASIC22.96■■□□□ 1.27
Cx3cl1O35188 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cx3cl1O35188 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.93■■□□□ 1.26
Cx3cl1O35188 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Cx3cl1O35188 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cx3cl1O35188 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cx3cl1O35188 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cx3cl1O35188 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.9■■□□□ 1.26
Cx3cl1O35188 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cx3cl1O35188 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.89■■□□□ 1.25
Cx3cl1O35188 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cx3cl1O35188 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cx3cl1O35188 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cx3cl1O35188 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cx3cl1O35188 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cx3cl1O35188 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.88■■□□□ 1.25
Cx3cl1O35188 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.87■■□□□ 1.25
Cx3cl1O35188 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.87■■□□□ 1.25
Cx3cl1O35188 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Cx3cl1O35188 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.86■■□□□ 1.25
Cx3cl1O35188 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cx3cl1O35188 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cx3cl1O35188 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cx3cl1O35188 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cx3cl1O35188 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cx3cl1O35188 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cx3cl1O35188 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cx3cl1O35188 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Cx3cl1O35188 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.84■■□□□ 1.25
Cx3cl1O35188 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.83■■□□□ 1.25
Cx3cl1O35188 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cx3cl1O35188 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.81■■□□□ 1.24
Cx3cl1O35188 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cx3cl1O35188 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cx3cl1O35188 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.8■■□□□ 1.24
Cx3cl1O35188 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms