Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ubr4A2AN08 Zfp131-207ENSMUST00000224946 1783 ntBASIC13.97□□□□□ -0.17
Ubr4A2AN08 Gm5812-201ENSMUST00000061073 957 ntBASIC13.96□□□□□ -0.17
Ubr4A2AN08 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ubr4A2AN08 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ubr4A2AN08 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.95□□□□□ -0.18
Ubr4A2AN08 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr4A2AN08 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr4A2AN08 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr4A2AN08 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr4A2AN08 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.92□□□□□ -0.18
Ubr4A2AN08 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubr4A2AN08 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC13.91□□□□□ -0.18
Ubr4A2AN08 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ubr4A2AN08 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ubr4A2AN08 Mipep-204ENSMUST00000225043 1548 ntBASIC13.9□□□□□ -0.18
Ubr4A2AN08 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ubr4A2AN08 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubr4A2AN08 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubr4A2AN08 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.88□□□□□ -0.19
Ubr4A2AN08 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubr4A2AN08 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubr4A2AN08 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ubr4A2AN08 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ubr4A2AN08 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubr4A2AN08 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Gm12366-201ENSMUST00000121722 873 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Gm5786-201ENSMUST00000085368 882 ntBASIC13.83□□□□□ -0.2
Ubr4A2AN08 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubr4A2AN08 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubr4A2AN08 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Gm6311-201ENSMUST00000073790 878 ntBASIC13.81□□□□□ -0.2
Ubr4A2AN08 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubr4A2AN08 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubr4A2AN08 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubr4A2AN08 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubr4A2AN08 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubr4A2AN08 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Gm4799-201ENSMUST00000095396 657 ntBASIC13.78□□□□□ -0.2
Ubr4A2AN08 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubr4A2AN08 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubr4A2AN08 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubr4A2AN08 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ubr4A2AN08 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubr4A2AN08 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.75□□□□□ -0.21
Ubr4A2AN08 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.74□□□□□ -0.21
Ubr4A2AN08 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.73□□□□□ -0.21
Ubr4A2AN08 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubr4A2AN08 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.73□□□□□ -0.21
Ubr4A2AN08 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ubr4A2AN08 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubr4A2AN08 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ubr4A2AN08 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubr4A2AN08 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubr4A2AN08 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.7□□□□□ -0.22
Ubr4A2AN08 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.7□□□□□ -0.22
Ubr4A2AN08 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ubr4A2AN08 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.69□□□□□ -0.22
Ubr4A2AN08 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.69□□□□□ -0.22
Ubr4A2AN08 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms