Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav23A0A0G2JG17 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav23A0A0G2JG17 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Trav23A0A0G2JG17 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav23A0A0G2JG17 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav23A0A0G2JG17 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav23A0A0G2JG17 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Gm24970-201ENSMUST00000175582 82 ntBASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.85■□□□□ 0.77
Trav23A0A0G2JG17 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav23A0A0G2JG17 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav23A0A0G2JG17 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.83■□□□□ 0.76
Trav23A0A0G2JG17 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav23A0A0G2JG17 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.82■□□□□ 0.76
Trav23A0A0G2JG17 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav23A0A0G2JG17 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav23A0A0G2JG17 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trav23A0A0G2JG17 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav23A0A0G2JG17 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav23A0A0G2JG17 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.73■□□□□ 0.75
Trav23A0A0G2JG17 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trav23A0A0G2JG17 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav23A0A0G2JG17 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav23A0A0G2JG17 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav23A0A0G2JG17 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms