Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav7n-5A0A075B604 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav7n-5A0A075B604 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav7n-5A0A075B604 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.44■□□□□ 0.86
Trav7n-5A0A075B604 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav7n-5A0A075B604 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7n-5A0A075B604 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7n-5A0A075B604 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7n-5A0A075B604 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav7n-5A0A075B604 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav7n-5A0A075B604 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav7n-5A0A075B604 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav7n-5A0A075B604 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav7n-5A0A075B604 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav7n-5A0A075B604 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav7n-5A0A075B604 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav7n-5A0A075B604 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.39■□□□□ 0.85
Trav7n-5A0A075B604 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav7n-5A0A075B604 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav7n-5A0A075B604 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav7n-5A0A075B604 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav7n-5A0A075B604 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav7n-5A0A075B604 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav7n-5A0A075B604 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Trav7n-5A0A075B604 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav7n-5A0A075B604 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav7n-5A0A075B604 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trav7n-5A0A075B604 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7n-5A0A075B604 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav7n-5A0A075B604 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Trav7n-5A0A075B604 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav7n-5A0A075B604 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav7n-5A0A075B604 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav7n-5A0A075B604 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.32■□□□□ 0.84
Trav7n-5A0A075B604 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav7n-5A0A075B604 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav7n-5A0A075B604 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav7n-5A0A075B604 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.29■□□□□ 0.84
Trav7n-5A0A075B604 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav7n-5A0A075B604 Zxda-201ENSMUST00000117281 2621 ntBASIC20.29■□□□□ 0.84
Trav7n-5A0A075B604 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.28■□□□□ 0.84
Trav7n-5A0A075B604 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav7n-5A0A075B604 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav7n-5A0A075B604 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav7n-5A0A075B604 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7n-5A0A075B604 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7n-5A0A075B604 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
Trav7n-5A0A075B604 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav7n-5A0A075B604 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav7n-5A0A075B604 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.25■□□□□ 0.83
Trav7n-5A0A075B604 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav7n-5A0A075B604 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7n-5A0A075B604 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7n-5A0A075B604 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7n-5A0A075B604 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7n-5A0A075B604 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav7n-5A0A075B604 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav7n-5A0A075B604 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav7n-5A0A075B604 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav7n-5A0A075B604 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav7n-5A0A075B604 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav7n-5A0A075B604 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav7n-5A0A075B604 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.17■□□□□ 0.82
Trav7n-5A0A075B604 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trav7n-5A0A075B604 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.17■□□□□ 0.82
Trav7n-5A0A075B604 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav7n-5A0A075B604 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.14■□□□□ 0.82
Trav7n-5A0A075B604 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav7n-5A0A075B604 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav7n-5A0A075B604 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav7n-5A0A075B604 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav7n-5A0A075B604 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav7n-5A0A075B604 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.13■□□□□ 0.81
Trav7n-5A0A075B604 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav7n-5A0A075B604 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav7n-5A0A075B604 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.11■□□□□ 0.81
Trav7n-5A0A075B604 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7n-5A0A075B604 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7n-5A0A075B604 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav7n-5A0A075B604 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7n-5A0A075B604 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav7n-5A0A075B604 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav7n-5A0A075B604 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav7n-5A0A075B604 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav7n-5A0A075B604 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav7n-5A0A075B604 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav7n-5A0A075B604 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav7n-5A0A075B604 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav7n-5A0A075B604 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav7n-5A0A075B604 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav7n-5A0A075B604 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav7n-5A0A075B604 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav7n-5A0A075B604 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms