Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL1A2P08123 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.27■■□□□ 1.32
COL1A2P08123 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.27■■□□□ 1.32
COL1A2P08123 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.27■■□□□ 1.32
COL1A2P08123 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL1A2P08123 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.27■■□□□ 1.32
COL1A2P08123 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.27■■□□□ 1.32
COL1A2P08123 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.27■■□□□ 1.31
COL1A2P08123 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.27■■□□□ 1.31
COL1A2P08123 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL1A2P08123 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.27■■□□□ 1.31
COL1A2P08123 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.31
COL1A2P08123 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.27■■□□□ 1.31
COL1A2P08123 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.27■■□□□ 1.31
COL1A2P08123 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL1A2P08123 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.26■■□□□ 1.31
COL1A2P08123 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.26■■□□□ 1.31
COL1A2P08123 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL1A2P08123 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.26■■□□□ 1.31
COL1A2P08123 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL1A2P08123 AC069152.1-201ENST00000438030 544 ntBASIC23.26■■□□□ 1.31
COL1A2P08123 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.26■■□□□ 1.31
COL1A2P08123 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.26■■□□□ 1.31
COL1A2P08123 AC016405.3-201ENST00000607710 860 ntBASIC23.26■■□□□ 1.31
COL1A2P08123 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.25■■□□□ 1.31
COL1A2P08123 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL1A2P08123 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
COL1A2P08123 MKRN4P-201ENST00000444706 1521 ntBASIC23.25■■□□□ 1.31
COL1A2P08123 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL1A2P08123 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.25■■□□□ 1.31
COL1A2P08123 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
COL1A2P08123 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 AC068473.5-201ENST00000616428 2072 ntBASIC23.24■■□□□ 1.31
COL1A2P08123 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
COL1A2P08123 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.24■■□□□ 1.31
COL1A2P08123 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 AC133041.1-202ENST00000642053 222 ntBASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL1A2P08123 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.23■■□□□ 1.31
COL1A2P08123 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 AC245052.3-201ENST00000450182 901 ntBASIC23.23■■□□□ 1.31
COL1A2P08123 AC093787.1-201ENST00000450396 207 ntBASIC23.23■■□□□ 1.31
COL1A2P08123 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL1A2P08123 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.23■■□□□ 1.31
COL1A2P08123 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.23■■□□□ 1.31
COL1A2P08123 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
COL1A2P08123 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
COL1A2P08123 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.22■■□□□ 1.31
COL1A2P08123 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.22■■□□□ 1.31
COL1A2P08123 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.22■■□□□ 1.31
COL1A2P08123 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.22■■□□□ 1.31
COL1A2P08123 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.22■■□□□ 1.31
COL1A2P08123 MIR4758-201ENST00000577688 71 ntBASIC23.22■■□□□ 1.31
COL1A2P08123 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.22■■□□□ 1.31
COL1A2P08123 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
COL1A2P08123 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A2P08123 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A2P08123 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.21■■□□□ 1.31
COL1A2P08123 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A2P08123 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.21■■□□□ 1.31
COL1A2P08123 MIPEPP3-201ENST00000412105 444 ntBASIC23.21■■□□□ 1.31
COL1A2P08123 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.21■■□□□ 1.31
COL1A2P08123 RARRES2P4-201ENST00000514074 484 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms