Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 SKA3-206ENST00000475251 397 ntTSL 212.33□□□□□ -0.443e-14■□□□□ 9.2
DDX3XO00571 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.551e-7■□□□□ 9.2
DDX3XO00571 CBLL1-205ENST00000440859 4432 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.571e-7■□□□□ 9.2
DDX3XO00571 PEX2-206ENST00000522527 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.581e-7■□□□□ 9.2
DDX3XO00571 PEX2-205ENST00000520203 688 ntTSL 411.27□□□□□ -0.611e-7■□□□□ 9.2
DDX3XO00571 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC10.8□□□□□ -0.683e-14■□□□□ 9.2
DDX3XO00571 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC10.8□□□□□ -0.681e-7■□□□□ 9.2
DDX3XO00571 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.741e-7■□□□□ 9.2
DDX3XO00571 OTUD6B-203ENST00000522894 1631 ntTSL 210.26□□□□□ -0.771e-7■□□□□ 9.2
DDX3XO00571 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC10.15□□□□□ -0.791e-7■□□□□ 9.2
DDX3XO00571 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC10.02□□□□□ -0.811e-7■□□□□ 9.2
DDX3XO00571 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.831e-7■□□□□ 9.2
DDX3XO00571 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC9.53□□□□□ -0.881e-7■□□□□ 9.2
DDX3XO00571 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.48□□□□□ -1.051e-7■□□□□ 9.2
DDX3XO00571 NBR2-201ENST00000356906 978 ntTSL 1 (best)8.37□□□□□ -1.071e-7■□□□□ 9.2
DDX3XO00571 PEX2-203ENST00000519956 473 ntTSL 57.79□□□□□ -1.161e-7■□□□□ 9.2
DDX3XO00571 CBLL1-208ENST00000493361 587 ntTSL 37.68□□□□□ -1.181e-7■□□□□ 9.2
DDX3XO00571 CBLL1-204ENST00000432748 573 ntTSL 27.12□□□□□ -1.271e-7■□□□□ 9.2
DDX3XO00571 AP2B1-210ENST00000593014 577 ntTSL 46.96□□□□□ -1.31e-7■□□□□ 9.2
DDX3XO00571 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.6□□□□□ -1.351e-7■□□□□ 9.2
DDX3XO00571 OTUD6B-204ENST00000524027 1330 ntTSL 1 (best)6.16□□□□□ -1.421e-7■□□□□ 9.2
DDX3XO00571 PSMA3-210ENST00000556321 500 ntTSL 26□□□□□ -1.452e-27■□□□□ 9.2
DDX3XO00571 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.99□□□□□ -1.451e-7■□□□□ 9.2
DDX3XO00571 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.451e-7■□□□□ 9.2
DDX3XO00571 CBLL1-207ENST00000487517 560 ntTSL 35.96□□□□□ -1.461e-7■□□□□ 9.2
DDX3XO00571 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.53□□□□□ -1.681e-7■□□□□ 9.2
DDX3XO00571 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.731e-7■□□□□ 9.2
DDX3XO00571 UQCRHL-201ENST00000483273 2180 ntAPPRIS P1 BASIC12.82□□□□□ -0.368e-14■□□□□ 9.2
DDX3XO00571 ARF4-203ENST00000483848 404 ntTSL 53.39□□□□□ -1.878e-35■□□□□ 9.2
DDX3XO00571 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.092e-9■□□□□ 9.2
DDX3XO00571 RPS19-207ENST00000600467 420 ntTSL 221.74■■□□□ 1.073e-29■□□□□ 9.2
DDX3XO00571 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.338e-29■□□□□ 9.2
DDX3XO00571 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.73■□□□□ 0.278e-29■□□□□ 9.2
DDX3XO00571 RPS19-205ENST00000598466 601 ntTSL 212.44□□□□□ -0.423e-29■□□□□ 9.2
DDX3XO00571 RPS19-208ENST00000601492 342 ntTSL 58.1□□□□□ -1.113e-29■□□□□ 9.2
DDX3XO00571 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.162e-27■□□□□ 9.2
DDX3XO00571 C2orf82-208ENST00000481155 660 ntTSL 322.39■■□□□ 1.175e-9■□□□□ 9.2
DDX3XO00571 RNASET2-212ENST00000510083 2280 ntTSL 217.31■□□□□ 0.365e-9■□□□□ 9.2
DDX3XO00571 COBLL1-207ENST00000439313 565 ntTSL 515.25■□□□□ 0.035e-9■□□□□ 9.2
DDX3XO00571 RNASET2-205ENST00000467705 524 ntTSL 510.64□□□□□ -0.715e-9■□□□□ 9.2
DDX3XO00571 TTK-204ENST00000502580 541 ntTSL 421.43■■□□□ 1.022e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.92e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-204ENST00000554191 597 ntTSL 420.11■□□□□ 0.812e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-207ENST00000556393 548 ntTSL 518.23■□□□□ 0.512e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.7■□□□□ 0.422e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.63■□□□□ 0.412e-6■□□□□ 9.2
DDX3XO00571 TTK-209ENST00000511260 549 ntTSL 417.62■□□□□ 0.412e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-208ENST00000590829 703 ntTSL 417.09■□□□□ 0.332e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.41■□□□□ 0.222e-6■□□□□ 9.2
DDX3XO00571 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15□□□□□ -0.012e-6■□□□□ 9.2
DDX3XO00571 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.112e-6■□□□□ 9.2
DDX3XO00571 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.214e-18■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-209ENST00000591223 572 ntTSL 413.39□□□□□ -0.272e-6■□□□□ 9.2
DDX3XO00571 TTK-208ENST00000509894 3725 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.382e-6■□□□□ 9.2
DDX3XO00571 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.612e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-206ENST00000455567 2325 ntTSL 1 (best)10.84□□□□□ -0.672e-6■□□□□ 9.2
DDX3XO00571 GTF2I-201ENST00000432143 572 ntTSL 410.25□□□□□ -0.772e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.51□□□□□ -0.892e-6■□□□□ 9.2
DDX3XO00571 TTK-205ENST00000504040 569 ntTSL 27.98□□□□□ -1.132e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.84□□□□□ -1.152e-6■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-205ENST00000444998 2193 ntTSL 26.91□□□□□ -1.32e-6■□□□□ 9.2
DDX3XO00571 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.55□□□□□ -1.364e-18■□□□□ 9.2
DDX3XO00571 SAMSN1-205ENST00000493640 282 ntTSL 36.46□□□□□ -1.384e-18■□□□□ 9.2
DDX3XO00571 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.25□□□□□ -1.412e-6■□□□□ 9.2
DDX3XO00571 TXNDC9-204ENST00000422767 768 ntTSL 56.24□□□□□ -1.412e-6■□□□□ 9.2
DDX3XO00571 TOMM20-203ENST00000473132 365 ntTSL 26.2□□□□□ -1.422e-6■□□□□ 9.2
DDX3XO00571 RNF216P1-206ENST00000406608 576 ntTSL 45.9□□□□□ -1.462e-6■□□□□ 9.2
DDX3XO00571 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.474e-18■□□□□ 9.2
DDX3XO00571 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.79□□□□□ -1.484e-18■□□□□ 9.2
DDX3XO00571 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.89□□□□□ -1.634e-18■□□□□ 9.2
DDX3XO00571 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.65□□□□□ -1.672e-6■□□□□ 9.2
DDX3XO00571 TTK-207ENST00000509313 530 ntTSL 44.63□□□□□ -1.672e-6■□□□□ 9.2
DDX3XO00571 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.1□□□□□ -1.754e-18■□□□□ 9.2
DDX3XO00571 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.022e-6■□□□□ 9.2
DDX3XO00571 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.73■□□□□ 0.272e-28■□□□□ 9.2
DDX3XO00571 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.242e-28■□□□□ 9.2
DDX3XO00571 MAEL-206ENST00000622874 1700 ntTSL 1 (best) BASIC13.09□□□□□ -0.312e-28■□□□□ 9.2
DDX3XO00571 MAEL-203ENST00000447624 1013 ntTSL 311.99□□□□□ -0.492e-28■□□□□ 9.2
DDX3XO00571 MAEL-205ENST00000491055 2355 ntTSL 1 (best)10.54□□□□□ -0.722e-28■□□□□ 9.2
DDX3XO00571 RNA5SP65-201ENST00000363166 119 ntBASIC7.28□□□□□ -1.242e-28■□□□□ 9.2
DDX3XO00571 ALDH4A1-203ENST00000432718 844 ntTSL 316.65■□□□□ 0.265e-8■□□□□ 9.2
DDX3XO00571 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.37■■□□□ 1.814e-6■□□□□ 9.2
DDX3XO00571 IK-207ENST00000513256 569 ntTSL 412.26□□□□□ -0.452e-11■□□□□ 9.2
DDX3XO00571 IK-204ENST00000507593 489 ntTSL 311.98□□□□□ -0.492e-11■□□□□ 9.2
DDX3XO00571 IK-205ENST00000508301 868 ntTSL 211.98□□□□□ -0.492e-11■□□□□ 9.2
DDX3XO00571 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.662e-11■□□□□ 9.2
DDX3XO00571 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC10.76□□□□□ -0.696e-22■□□□□ 9.2
DDX3XO00571 IK-203ENST00000503332 540 ntTSL 48.91□□□□□ -0.982e-11■□□□□ 9.2
DDX3XO00571 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.733e-17■□□□□ 9.2
DDX3XO00571 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.02■□□□□ 0.963e-17■□□□□ 9.2
DDX3XO00571 KRT18-206ENST00000549078 2088 ntTSL 520.74■□□□□ 0.913e-17■□□□□ 9.2
DDX3XO00571 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.893e-17■□□□□ 9.2
DDX3XO00571 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.623e-17■□□□□ 9.2
DDX3XO00571 EIF2S1-201ENST00000256383 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.545e-7■□□□□ 9.2
DDX3XO00571 EIF2S1-205ENST00000556724 527 ntTSL 28.88□□□□□ -0.995e-7■□□□□ 9.2
DDX3XO00571 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.132e-6■□□□□ 9.2
DDX3XO00571 LANCL1-208ENST00000453956 590 ntTSL 413.2□□□□□ -0.32e-6■□□□□ 9.2
DDX3XO00571 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.52e-6■□□□□ 9.2
DDX3XO00571 LANCL1-206ENST00000448951 808 ntTSL 311.64□□□□□ -0.552e-6■□□□□ 9.2
Retrieved 100 of 47,714 protein–RNA pairs in 3655.5 ms