Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CcsQ9WU84 Gm27322-201ENSMUST00000184007 104 ntBASIC19.2■□□□□ 0.66
CcsQ9WU84 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CcsQ9WU84 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CcsQ9WU84 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CcsQ9WU84 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcsQ9WU84 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CcsQ9WU84 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcsQ9WU84 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
CcsQ9WU84 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CcsQ9WU84 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CcsQ9WU84 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CcsQ9WU84 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CcsQ9WU84 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CcsQ9WU84 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CcsQ9WU84 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CcsQ9WU84 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CcsQ9WU84 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CcsQ9WU84 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CcsQ9WU84 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CcsQ9WU84 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CcsQ9WU84 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.07■□□□□ 0.64
CcsQ9WU84 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CcsQ9WU84 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcsQ9WU84 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcsQ9WU84 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.02■□□□□ 0.64
CcsQ9WU84 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcsQ9WU84 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.02■□□□□ 0.63
CcsQ9WU84 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CcsQ9WU84 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcsQ9WU84 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcsQ9WU84 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.97■□□□□ 0.63
CcsQ9WU84 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CcsQ9WU84 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CcsQ9WU84 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CcsQ9WU84 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CcsQ9WU84 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.93■□□□□ 0.62
CcsQ9WU84 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.93■□□□□ 0.62
CcsQ9WU84 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CcsQ9WU84 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CcsQ9WU84 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.91■□□□□ 0.62
CcsQ9WU84 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CcsQ9WU84 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CcsQ9WU84 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CcsQ9WU84 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.87■□□□□ 0.61
CcsQ9WU84 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CcsQ9WU84 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcsQ9WU84 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Gm24804-201ENSMUST00000174982 85 ntBASIC18.85■□□□□ 0.61
CcsQ9WU84 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcsQ9WU84 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CcsQ9WU84 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcsQ9WU84 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CcsQ9WU84 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CcsQ9WU84 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.8■□□□□ 0.6
CcsQ9WU84 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.79■□□□□ 0.6
CcsQ9WU84 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcsQ9WU84 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CcsQ9WU84 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcsQ9WU84 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms