Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssna1Q9JJ94 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssna1Q9JJ94 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssna1Q9JJ94 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssna1Q9JJ94 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssna1Q9JJ94 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ssna1Q9JJ94 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Ssna1Q9JJ94 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssna1Q9JJ94 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssna1Q9JJ94 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssna1Q9JJ94 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssna1Q9JJ94 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssna1Q9JJ94 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssna1Q9JJ94 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssna1Q9JJ94 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ssna1Q9JJ94 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssna1Q9JJ94 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ssna1Q9JJ94 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssna1Q9JJ94 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.55■□□□□ 0.88
Ssna1Q9JJ94 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ssna1Q9JJ94 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.54■□□□□ 0.88
Ssna1Q9JJ94 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssna1Q9JJ94 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ssna1Q9JJ94 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.52■□□□□ 0.88
Ssna1Q9JJ94 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssna1Q9JJ94 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Ssna1Q9JJ94 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssna1Q9JJ94 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssna1Q9JJ94 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssna1Q9JJ94 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssna1Q9JJ94 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssna1Q9JJ94 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssna1Q9JJ94 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssna1Q9JJ94 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssna1Q9JJ94 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ssna1Q9JJ94 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.45■□□□□ 0.86
Ssna1Q9JJ94 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssna1Q9JJ94 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssna1Q9JJ94 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssna1Q9JJ94 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssna1Q9JJ94 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssna1Q9JJ94 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ssna1Q9JJ94 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.38■□□□□ 0.85
Ssna1Q9JJ94 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ssna1Q9JJ94 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssna1Q9JJ94 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
Ssna1Q9JJ94 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssna1Q9JJ94 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.35■□□□□ 0.85
Ssna1Q9JJ94 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssna1Q9JJ94 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssna1Q9JJ94 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssna1Q9JJ94 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssna1Q9JJ94 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssna1Q9JJ94 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssna1Q9JJ94 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ssna1Q9JJ94 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssna1Q9JJ94 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssna1Q9JJ94 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssna1Q9JJ94 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.31■□□□□ 0.84
Ssna1Q9JJ94 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssna1Q9JJ94 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ssna1Q9JJ94 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssna1Q9JJ94 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssna1Q9JJ94 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ssna1Q9JJ94 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssna1Q9JJ94 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssna1Q9JJ94 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ssna1Q9JJ94 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Ssna1Q9JJ94 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssna1Q9JJ94 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssna1Q9JJ94 Gm24109-201ENSMUST00000175489 103 ntBASIC20.26■□□□□ 0.83
Ssna1Q9JJ94 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssna1Q9JJ94 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssna1Q9JJ94 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ssna1Q9JJ94 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssna1Q9JJ94 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssna1Q9JJ94 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssna1Q9JJ94 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssna1Q9JJ94 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssna1Q9JJ94 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.22■□□□□ 0.83
Ssna1Q9JJ94 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ssna1Q9JJ94 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssna1Q9JJ94 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssna1Q9JJ94 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssna1Q9JJ94 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ssna1Q9JJ94 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssna1Q9JJ94 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssna1Q9JJ94 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssna1Q9JJ94 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms