Protein–RNA interactions for Protein: Q920N1

Odf3, Outer dense fiber protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3Q920N1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.97■□□□□ 0.63
Odf3Q920N1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Odf3Q920N1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Odf3Q920N1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Odf3Q920N1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Odf3Q920N1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Odf3Q920N1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Odf3Q920N1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Odf3Q920N1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Odf3Q920N1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.93■□□□□ 0.62
Odf3Q920N1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Odf3Q920N1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Odf3Q920N1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Odf3Q920N1 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.92■□□□□ 0.62
Odf3Q920N1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Odf3Q920N1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Odf3Q920N1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Odf3Q920N1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Odf3Q920N1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Odf3Q920N1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Odf3Q920N1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Odf3Q920N1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Odf3Q920N1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Odf3Q920N1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Odf3Q920N1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
Odf3Q920N1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.87■□□□□ 0.61
Odf3Q920N1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Odf3Q920N1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Odf3Q920N1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.85■□□□□ 0.61
Odf3Q920N1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.85■□□□□ 0.61
Odf3Q920N1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Odf3Q920N1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Odf3Q920N1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf3Q920N1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Odf3Q920N1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Odf3Q920N1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Odf3Q920N1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Odf3Q920N1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Odf3Q920N1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Odf3Q920N1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.77■□□□□ 0.6
Odf3Q920N1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.77■□□□□ 0.6
Odf3Q920N1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf3Q920N1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Odf3Q920N1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Odf3Q920N1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Odf3Q920N1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf3Q920N1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf3Q920N1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf3Q920N1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Odf3Q920N1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.7■□□□□ 0.58
Odf3Q920N1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Odf3Q920N1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf3Q920N1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Odf3Q920N1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf3Q920N1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Odf3Q920N1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Odf3Q920N1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf3Q920N1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf3Q920N1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Odf3Q920N1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf3Q920N1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf3Q920N1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.63■□□□□ 0.57
Odf3Q920N1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Odf3Q920N1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.61■□□□□ 0.57
Odf3Q920N1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.61■□□□□ 0.57
Odf3Q920N1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Odf3Q920N1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Odf3Q920N1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Odf3Q920N1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Odf3Q920N1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Odf3Q920N1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Odf3Q920N1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Odf3Q920N1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Odf3Q920N1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Odf3Q920N1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms