Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Ddx54Q8K4L0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
Ddx54Q8K4L0 Gm43863-201ENSMUST00000203822 1192 ntBASIC34.73■■■■□ 3.15
Ddx54Q8K4L0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ddx54Q8K4L0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ddx54Q8K4L0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Ddx54Q8K4L0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Ddx54Q8K4L0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC34.61■■■■□ 3.13
Ddx54Q8K4L0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
Ddx54Q8K4L0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
Ddx54Q8K4L0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Ddx54Q8K4L0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Ddx54Q8K4L0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Ddx54Q8K4L0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC34.56■■■■□ 3.12
Ddx54Q8K4L0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC34.55■■■■□ 3.12
Ddx54Q8K4L0 Gm42809-201ENSMUST00000198429 1138 ntBASIC34.54■■■■□ 3.12
Ddx54Q8K4L0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC34.53■■■■□ 3.12
Ddx54Q8K4L0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC34.51■■■■□ 3.12
Ddx54Q8K4L0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Ddx54Q8K4L0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC34.5■■■■□ 3.11
Ddx54Q8K4L0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC34.49■■■■□ 3.11
Ddx54Q8K4L0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
Ddx54Q8K4L0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ddx54Q8K4L0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ddx54Q8K4L0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ddx54Q8K4L0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Ddx54Q8K4L0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Ddx54Q8K4L0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Ddx54Q8K4L0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
Ddx54Q8K4L0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ddx54Q8K4L0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ddx54Q8K4L0 AC157572.2-201ENSMUST00000226970 908 ntBASIC34.39■■■■□ 3.1
Ddx54Q8K4L0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC34.37■■■■□ 3.09
Ddx54Q8K4L0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ddx54Q8K4L0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ddx54Q8K4L0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Ddx54Q8K4L0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ddx54Q8K4L0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC34.33■■■■□ 3.09
Ddx54Q8K4L0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Ddx54Q8K4L0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC34.3■■■■□ 3.08
Ddx54Q8K4L0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC34.29■■■■□ 3.08
Ddx54Q8K4L0 Gm7432-201ENSMUST00000210343 879 ntBASIC34.29■■■■□ 3.08
Ddx54Q8K4L0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Ddx54Q8K4L0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ddx54Q8K4L0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC34.27■■■■□ 3.08
Ddx54Q8K4L0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Ddx54Q8K4L0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ddx54Q8K4L0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Ddx54Q8K4L0 Nkain2-201ENSMUST00000092602 558 ntBASIC34.25■■■■□ 3.07
Ddx54Q8K4L0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ddx54Q8K4L0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Ddx54Q8K4L0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Ddx54Q8K4L0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ddx54Q8K4L0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC34.21■■■■□ 3.07
Ddx54Q8K4L0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ddx54Q8K4L0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ddx54Q8K4L0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ddx54Q8K4L0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
Ddx54Q8K4L0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
Ddx54Q8K4L0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC34.19■■■■□ 3.06
Ddx54Q8K4L0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Ddx54Q8K4L0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC34.17■■■■□ 3.06
Ddx54Q8K4L0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ddx54Q8K4L0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ddx54Q8K4L0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC34.14■■■■□ 3.06
Ddx54Q8K4L0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ddx54Q8K4L0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Ddx54Q8K4L0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Ddx54Q8K4L0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Ddx54Q8K4L0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC34.08■■■■□ 3.05
Ddx54Q8K4L0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Ddx54Q8K4L0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
Ddx54Q8K4L0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC34.04■■■■□ 3.04
Ddx54Q8K4L0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC34.04■■■■□ 3.04
Ddx54Q8K4L0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ddx54Q8K4L0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
Ddx54Q8K4L0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC34.01■■■■□ 3.03
Ddx54Q8K4L0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC34■■■■□ 3.03
Ddx54Q8K4L0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34■■■■□ 3.03
Ddx54Q8K4L0 Gm11599-201ENSMUST00000118720 878 ntBASIC33.99■■■■□ 3.03
Ddx54Q8K4L0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Ddx54Q8K4L0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Ddx54Q8K4L0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
Ddx54Q8K4L0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ddx54Q8K4L0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC33.97■■■■□ 3.03
Ddx54Q8K4L0 Mir6538-201ENSMUST00000183713 110 ntBASIC33.96■■■■□ 3.03
Ddx54Q8K4L0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC33.96■■■■□ 3.03
Ddx54Q8K4L0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
Ddx54Q8K4L0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Ddx54Q8K4L0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Ddx54Q8K4L0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Ddx54Q8K4L0 Gm11175-201ENSMUST00000116172 543 ntBASIC33.94■■■■□ 3.02
Ddx54Q8K4L0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC33.94■■■■□ 3.02
Ddx54Q8K4L0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Ddx54Q8K4L0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Ddx54Q8K4L0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
Ddx54Q8K4L0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Ddx54Q8K4L0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
Ddx54Q8K4L0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
Ddx54Q8K4L0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms