Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd9Q8BYH8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd9Q8BYH8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd9Q8BYH8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.87■□□□□ 0.93
Chd9Q8BYH8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.86■□□□□ 0.93
Chd9Q8BYH8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd9Q8BYH8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd9Q8BYH8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.85■□□□□ 0.93
Chd9Q8BYH8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.85■□□□□ 0.93
Chd9Q8BYH8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd9Q8BYH8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd9Q8BYH8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chd9Q8BYH8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chd9Q8BYH8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd9Q8BYH8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd9Q8BYH8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd9Q8BYH8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd9Q8BYH8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd9Q8BYH8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd9Q8BYH8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Chd9Q8BYH8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.76■□□□□ 0.91
Chd9Q8BYH8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd9Q8BYH8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd9Q8BYH8 Mipep-204ENSMUST00000225043 1548 ntBASIC20.75■□□□□ 0.91
Chd9Q8BYH8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd9Q8BYH8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd9Q8BYH8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd9Q8BYH8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd9Q8BYH8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd9Q8BYH8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Chd9Q8BYH8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.7■□□□□ 0.9
Chd9Q8BYH8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chd9Q8BYH8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chd9Q8BYH8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd9Q8BYH8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd9Q8BYH8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd9Q8BYH8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd9Q8BYH8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chd9Q8BYH8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.64■□□□□ 0.89
Chd9Q8BYH8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd9Q8BYH8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd9Q8BYH8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd9Q8BYH8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.62■□□□□ 0.89
Chd9Q8BYH8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd9Q8BYH8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.58■□□□□ 0.89
Chd9Q8BYH8 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.58■□□□□ 0.88
Chd9Q8BYH8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd9Q8BYH8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd9Q8BYH8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Chd9Q8BYH8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd9Q8BYH8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd9Q8BYH8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd9Q8BYH8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd9Q8BYH8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd9Q8BYH8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd9Q8BYH8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Chd9Q8BYH8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.51■□□□□ 0.87
Chd9Q8BYH8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd9Q8BYH8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Chd9Q8BYH8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd9Q8BYH8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd9Q8BYH8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd9Q8BYH8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd9Q8BYH8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd9Q8BYH8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Chd9Q8BYH8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.44■□□□□ 0.86
Chd9Q8BYH8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd9Q8BYH8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.44■□□□□ 0.86
Chd9Q8BYH8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.44■□□□□ 0.86
Chd9Q8BYH8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.44■□□□□ 0.86
Chd9Q8BYH8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd9Q8BYH8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd9Q8BYH8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.42■□□□□ 0.86
Chd9Q8BYH8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd9Q8BYH8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd9Q8BYH8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd9Q8BYH8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd9Q8BYH8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd9Q8BYH8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd9Q8BYH8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd9Q8BYH8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.39■□□□□ 0.86
Chd9Q8BYH8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd9Q8BYH8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd9Q8BYH8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd9Q8BYH8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd9Q8BYH8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd9Q8BYH8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.36■□□□□ 0.85
Chd9Q8BYH8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd9Q8BYH8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd9Q8BYH8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.35■□□□□ 0.85
Chd9Q8BYH8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chd9Q8BYH8 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.33■□□□□ 0.84
Chd9Q8BYH8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd9Q8BYH8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd9Q8BYH8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd9Q8BYH8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd9Q8BYH8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chd9Q8BYH8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd9Q8BYH8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.3■□□□□ 0.84
Chd9Q8BYH8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms