Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Rad23bP54728 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rad23bP54728 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Rad23bP54728 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Rad23bP54728 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rad23bP54728 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.34■■■□□ 2.77
Rad23bP54728 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.32■■■□□ 2.76
Rad23bP54728 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.31■■■□□ 2.76
Rad23bP54728 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Rad23bP54728 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Rad23bP54728 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.3■■■□□ 2.76
Rad23bP54728 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Rad23bP54728 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Rad23bP54728 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.27■■■□□ 2.76
Rad23bP54728 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Rad23bP54728 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rad23bP54728 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rad23bP54728 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rad23bP54728 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.25■■■□□ 2.75
Rad23bP54728 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rad23bP54728 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.23■■■□□ 2.75
Rad23bP54728 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Rad23bP54728 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
Rad23bP54728 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Rad23bP54728 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rad23bP54728 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rad23bP54728 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
Rad23bP54728 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Rad23bP54728 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC32.14■■■□□ 2.74
Rad23bP54728 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Rad23bP54728 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.11■■■□□ 2.73
Rad23bP54728 Gm7432-201ENSMUST00000210343 879 ntBASIC32.11■■■□□ 2.73
Rad23bP54728 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Rad23bP54728 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rad23bP54728 Gm11175-201ENSMUST00000116172 543 ntBASIC32.09■■■□□ 2.73
Rad23bP54728 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rad23bP54728 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.08■■■□□ 2.73
Rad23bP54728 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC32.07■■■□□ 2.72
Rad23bP54728 Cap2-205ENSMUST00000225824 1634 ntBASIC32.07■■■□□ 2.72
Rad23bP54728 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.06■■■□□ 2.72
Rad23bP54728 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rad23bP54728 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Rad23bP54728 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Rad23bP54728 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rad23bP54728 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rad23bP54728 Mir6538-201ENSMUST00000183713 110 ntBASIC32.02■■■□□ 2.72
Rad23bP54728 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Rad23bP54728 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.01■■■□□ 2.72
Rad23bP54728 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.01■■■□□ 2.71
Rad23bP54728 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32■■■□□ 2.71
Rad23bP54728 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Rad23bP54728 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rad23bP54728 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.97■■■□□ 2.71
Rad23bP54728 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rad23bP54728 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.96■■■□□ 2.71
Rad23bP54728 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Rad23bP54728 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rad23bP54728 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rad23bP54728 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rad23bP54728 Nkain2-201ENSMUST00000092602 558 ntBASIC31.92■■■□□ 2.7
Rad23bP54728 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Rad23bP54728 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Rad23bP54728 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Rad23bP54728 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Rad23bP54728 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Rad23bP54728 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.88■■■□□ 2.69
Rad23bP54728 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Rad23bP54728 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.87■■■□□ 2.69
Rad23bP54728 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rad23bP54728 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Rad23bP54728 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.85■■■□□ 2.69
Rad23bP54728 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rad23bP54728 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.84■■■□□ 2.69
Rad23bP54728 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rad23bP54728 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rad23bP54728 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Rad23bP54728 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Rad23bP54728 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Rad23bP54728 Gm11599-201ENSMUST00000118720 878 ntBASIC31.8■■■□□ 2.68
Rad23bP54728 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rad23bP54728 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Rad23bP54728 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Rad23bP54728 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rad23bP54728 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Rad23bP54728 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rad23bP54728 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Rad23bP54728 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rad23bP54728 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Rad23bP54728 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.68■■■□□ 2.66
Rad23bP54728 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rad23bP54728 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Rad23bP54728 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
Rad23bP54728 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Rad23bP54728 Gm15039-201ENSMUST00000118914 875 ntBASIC31.63■■■□□ 2.65
Rad23bP54728 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rad23bP54728 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
Rad23bP54728 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rad23bP54728 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Rad23bP54728 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rad23bP54728 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms