Protein–RNA interactions for Protein: J3QP53

Gm5294, Predicted gene 5294, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5294J3QP53 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5294J3QP53 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5294J3QP53 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Gm5294J3QP53 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5294J3QP53 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5294J3QP53 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gm5294J3QP53 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5294J3QP53 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.69■□□□□ 0.74
Gm5294J3QP53 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5294J3QP53 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5294J3QP53 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm5294J3QP53 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm5294J3QP53 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm5294J3QP53 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm5294J3QP53 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm5294J3QP53 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm5294J3QP53 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Gm5294J3QP53 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm5294J3QP53 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.64■□□□□ 0.73
Gm5294J3QP53 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm5294J3QP53 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm5294J3QP53 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm5294J3QP53 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm5294J3QP53 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm5294J3QP53 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm5294J3QP53 Zxda-201ENSMUST00000117281 2621 ntBASIC19.62■□□□□ 0.73
Gm5294J3QP53 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm5294J3QP53 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5294J3QP53 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gm5294J3QP53 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5294J3QP53 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.6■□□□□ 0.73
Gm5294J3QP53 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5294J3QP53 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gm5294J3QP53 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.59■□□□□ 0.73
Gm5294J3QP53 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm5294J3QP53 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm5294J3QP53 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5294J3QP53 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5294J3QP53 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5294J3QP53 Gm16148-201ENSMUST00000119653 893 ntBASIC19.56■□□□□ 0.72
Gm5294J3QP53 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5294J3QP53 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5294J3QP53 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5294J3QP53 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5294J3QP53 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5294J3QP53 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5294J3QP53 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5294J3QP53 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm5294J3QP53 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5294J3QP53 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5294J3QP53 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5294J3QP53 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5294J3QP53 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.47■□□□□ 0.71
Gm5294J3QP53 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5294J3QP53 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5294J3QP53 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5294J3QP53 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.45■□□□□ 0.7
Gm5294J3QP53 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm5294J3QP53 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm5294J3QP53 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5294J3QP53 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5294J3QP53 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5294J3QP53 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5294J3QP53 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5294J3QP53 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gm5294J3QP53 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5294J3QP53 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5294J3QP53 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5294J3QP53 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5294J3QP53 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5294J3QP53 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5294J3QP53 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5294J3QP53 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm5294J3QP53 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm5294J3QP53 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5294J3QP53 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5294J3QP53 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm5294J3QP53 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5294J3QP53 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5294J3QP53 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm5294J3QP53 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5294J3QP53 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5294J3QP53 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5294J3QP53 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm5294J3QP53 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5294J3QP53 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5294J3QP53 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5294J3QP53 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5294J3QP53 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm5294J3QP53 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5294J3QP53 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5294J3QP53 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm5294J3QP53 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5294J3QP53 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5294J3QP53 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms