Protein–RNA interactions for Protein: E9Q876

Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, mousemouse

Predictions only

Length 2,595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca12E9Q876 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Abca12E9Q876 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.47■■□□□ 1.19
Abca12E9Q876 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
Abca12E9Q876 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Abca12E9Q876 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Abca12E9Q876 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.43■■□□□ 1.18
Abca12E9Q876 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Abca12E9Q876 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Abca12E9Q876 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Abca12E9Q876 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Abca12E9Q876 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Abca12E9Q876 Mir6538-201ENSMUST00000183713 110 ntBASIC22.41■■□□□ 1.18
Abca12E9Q876 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Abca12E9Q876 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Abca12E9Q876 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.4■■□□□ 1.18
Abca12E9Q876 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Abca12E9Q876 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Abca12E9Q876 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
Abca12E9Q876 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Abca12E9Q876 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.39■■□□□ 1.17
Abca12E9Q876 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.37■■□□□ 1.17
Abca12E9Q876 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.36■■□□□ 1.17
Abca12E9Q876 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Abca12E9Q876 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abca12E9Q876 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Abca12E9Q876 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.31■■□□□ 1.16
Abca12E9Q876 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Abca12E9Q876 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Abca12E9Q876 Gm11175-201ENSMUST00000116172 543 ntBASIC22.28■■□□□ 1.16
Abca12E9Q876 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.26■■□□□ 1.15
Abca12E9Q876 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Abca12E9Q876 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Abca12E9Q876 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abca12E9Q876 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abca12E9Q876 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.24■■□□□ 1.15
Abca12E9Q876 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abca12E9Q876 Gm11599-201ENSMUST00000118720 878 ntBASIC22.23■■□□□ 1.15
Abca12E9Q876 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Abca12E9Q876 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abca12E9Q876 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Abca12E9Q876 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Abca12E9Q876 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Abca12E9Q876 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Abca12E9Q876 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Abca12E9Q876 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.19■■□□□ 1.14
Abca12E9Q876 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Abca12E9Q876 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Abca12E9Q876 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Abca12E9Q876 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.18■■□□□ 1.14
Abca12E9Q876 Cap2-205ENSMUST00000225824 1634 ntBASIC22.18■■□□□ 1.14
Abca12E9Q876 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Abca12E9Q876 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Abca12E9Q876 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Abca12E9Q876 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Abca12E9Q876 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Abca12E9Q876 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Abca12E9Q876 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.16■■□□□ 1.14
Abca12E9Q876 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Abca12E9Q876 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Abca12E9Q876 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Abca12E9Q876 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca12E9Q876 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca12E9Q876 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca12E9Q876 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Abca12E9Q876 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Abca12E9Q876 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Abca12E9Q876 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abca12E9Q876 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Abca12E9Q876 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Abca12E9Q876 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.06■■□□□ 1.12
Abca12E9Q876 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.05■■□□□ 1.12
Abca12E9Q876 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Abca12E9Q876 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Abca12E9Q876 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abca12E9Q876 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abca12E9Q876 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Abca12E9Q876 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Abca12E9Q876 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Abca12E9Q876 Gm15039-201ENSMUST00000118914 875 ntBASIC22■■□□□ 1.11
Abca12E9Q876 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22■■□□□ 1.11
Abca12E9Q876 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Abca12E9Q876 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22■■□□□ 1.11
Abca12E9Q876 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Abca12E9Q876 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Abca12E9Q876 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Abca12E9Q876 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Abca12E9Q876 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Abca12E9Q876 Nkain2-201ENSMUST00000092602 558 ntBASIC21.96■■□□□ 1.11
Abca12E9Q876 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca12E9Q876 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Abca12E9Q876 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Abca12E9Q876 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.93■■□□□ 1.1
Abca12E9Q876 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Abca12E9Q876 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Abca12E9Q876 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abca12E9Q876 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.91■■□□□ 1.1
Abca12E9Q876 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Abca12E9Q876 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Abca12E9Q876 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abca12E9Q876 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms