Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Cntnap3E9PY62 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cntnap3E9PY62 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.93■■■□□ 2.22
Cntnap3E9PY62 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.92■■■□□ 2.22
Cntnap3E9PY62 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.92■■■□□ 2.22
Cntnap3E9PY62 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cntnap3E9PY62 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cntnap3E9PY62 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cntnap3E9PY62 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cntnap3E9PY62 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Cntnap3E9PY62 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cntnap3E9PY62 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Cntnap3E9PY62 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cntnap3E9PY62 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.87■■■□□ 2.21
Cntnap3E9PY62 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Cntnap3E9PY62 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cntnap3E9PY62 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.84■■■□□ 2.21
Cntnap3E9PY62 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cntnap3E9PY62 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Cntnap3E9PY62 Mir6538-201ENSMUST00000183713 110 ntBASIC28.83■■■□□ 2.21
Cntnap3E9PY62 Gm7432-201ENSMUST00000210343 879 ntBASIC28.83■■■□□ 2.21
Cntnap3E9PY62 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cntnap3E9PY62 Cap2-205ENSMUST00000225824 1634 ntBASIC28.83■■■□□ 2.21
Cntnap3E9PY62 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Cntnap3E9PY62 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.82■■■□□ 2.2
Cntnap3E9PY62 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.82■■■□□ 2.2
Cntnap3E9PY62 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cntnap3E9PY62 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cntnap3E9PY62 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cntnap3E9PY62 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Cntnap3E9PY62 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cntnap3E9PY62 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Cntnap3E9PY62 Gm11175-201ENSMUST00000116172 543 ntBASIC28.76■■■□□ 2.19
Cntnap3E9PY62 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.73■■■□□ 2.19
Cntnap3E9PY62 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Cntnap3E9PY62 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap3E9PY62 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap3E9PY62 Gm15039-201ENSMUST00000118914 875 ntBASIC28.7■■■□□ 2.18
Cntnap3E9PY62 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.7■■■□□ 2.18
Cntnap3E9PY62 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Cntnap3E9PY62 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
Cntnap3E9PY62 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cntnap3E9PY62 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.67■■■□□ 2.18
Cntnap3E9PY62 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cntnap3E9PY62 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Cntnap3E9PY62 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Cntnap3E9PY62 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.65■■■□□ 2.18
Cntnap3E9PY62 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cntnap3E9PY62 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
Cntnap3E9PY62 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cntnap3E9PY62 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cntnap3E9PY62 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cntnap3E9PY62 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Cntnap3E9PY62 Nkain2-201ENSMUST00000092602 558 ntBASIC28.58■■■□□ 2.17
Cntnap3E9PY62 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap3E9PY62 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.56■■■□□ 2.16
Cntnap3E9PY62 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap3E9PY62 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Cntnap3E9PY62 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cntnap3E9PY62 Gm11599-201ENSMUST00000118720 878 ntBASIC28.54■■■□□ 2.16
Cntnap3E9PY62 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cntnap3E9PY62 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cntnap3E9PY62 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.53■■■□□ 2.16
Cntnap3E9PY62 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cntnap3E9PY62 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Cntnap3E9PY62 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Cntnap3E9PY62 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cntnap3E9PY62 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.5■■■□□ 2.15
Cntnap3E9PY62 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Cntnap3E9PY62 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cntnap3E9PY62 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap3E9PY62 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap3E9PY62 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.43■■■□□ 2.14
Cntnap3E9PY62 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cntnap3E9PY62 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cntnap3E9PY62 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cntnap3E9PY62 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
Cntnap3E9PY62 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.42■■■□□ 2.14
Cntnap3E9PY62 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.41■■■□□ 2.14
Cntnap3E9PY62 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
Cntnap3E9PY62 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Cntnap3E9PY62 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Cntnap3E9PY62 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cntnap3E9PY62 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cntnap3E9PY62 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap3E9PY62 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Cntnap3E9PY62 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap3E9PY62 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap3E9PY62 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cntnap3E9PY62 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.31■■■□□ 2.12
Cntnap3E9PY62 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cntnap3E9PY62 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Cntnap3E9PY62 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cntnap3E9PY62 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cntnap3E9PY62 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.29■■■□□ 2.12
Cntnap3E9PY62 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
Cntnap3E9PY62 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cntnap3E9PY62 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Cntnap3E9PY62 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.21■■■□□ 2.11
Cntnap3E9PY62 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms