Protein–RNA interactions for Protein: A0A0B4J1H7

Igkv1-135, Immunoglobulin kappa variable 1-135 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-135A0A0B4J1H7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv1-135A0A0B4J1H7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv1-135A0A0B4J1H7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv1-135A0A0B4J1H7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv1-135A0A0B4J1H7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.28■■□□□ 1
Igkv1-135A0A0B4J1H7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.28■■□□□ 1
Igkv1-135A0A0B4J1H7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Igkv1-135A0A0B4J1H7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Peli2-204ENSMUST00000226513 1320 ntBASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.25■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.16■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.12■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Amer2-203ENSMUST00000225247 2662 ntBASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gm24804-201ENSMUST00000174982 85 ntBASIC21.05■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms