Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mbd3l1Q9D9H3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mbd3l1Q9D9H3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mbd3l1Q9D9H3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mbd3l1Q9D9H3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Mbd3l1Q9D9H3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Mbd3l1Q9D9H3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Mbd3l1Q9D9H3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mbd3l1Q9D9H3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mbd3l1Q9D9H3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms