Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm37035-201ENSMUST00000194809 2148 ntBASIC30.31■■■□□ 2.44
Rpap1Q80TE0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rpap1Q80TE0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Rpap1Q80TE0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rpap1Q80TE0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Rpap1Q80TE0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC30.28■■■□□ 2.44
Rpap1Q80TE0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Rpap1Q80TE0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Rpap1Q80TE0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Gm12896-201ENSMUST00000118430 226 ntBASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Rpap1Q80TE0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
Rpap1Q80TE0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Rpap1Q80TE0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC30.26■■■□□ 2.44
Rpap1Q80TE0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Rpap1Q80TE0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC30.25■■■□□ 2.43
Rpap1Q80TE0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
Rpap1Q80TE0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rpap1Q80TE0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rpap1Q80TE0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rpap1Q80TE0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rpap1Q80TE0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rpap1Q80TE0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Rpap1Q80TE0 Gm13509-201ENSMUST00000119733 1308 ntBASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rpap1Q80TE0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Rpap1Q80TE0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
Rpap1Q80TE0 Gm5643-201ENSMUST00000117081 966 ntBASIC30.2■■■□□ 2.42
Rpap1Q80TE0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.42
Rpap1Q80TE0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Gm12504-201ENSMUST00000120860 2231 ntBASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Gm13836-201ENSMUST00000121159 501 ntBASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rpap1Q80TE0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rpap1Q80TE0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rpap1Q80TE0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rpap1Q80TE0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms