Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 PSE1YMR308C 3270 nt4.44□□□□□ -1.7
RPN11P43588 MRPS35YGR165W 1038 nt4.44□□□□□ -1.7
RPN11P43588 RPL8AYHL033C 771 nt4.44□□□□□ -1.7
RPN11P43588 YLR012CYLR012C 300 nt4.44□□□□□ -1.7
RPN11P43588 TMA16YOR252W 537 nt4.44□□□□□ -1.7
RPN11P43588 MRPL51YPR100W 423 nt4.44□□□□□ -1.7
RPN11P43588 ALG2YGL065C 1512 nt4.44□□□□□ -1.7
RPN11P43588 NGL3YML118W 1518 nt4.44□□□□□ -1.7
RPN11P43588 MGR3YMR115W 1506 nt4.44□□□□□ -1.7
RPN11P43588 HMG1YML075C 3165 nt4.44□□□□□ -1.7
RPN11P43588 LEU1YGL009C 2340 nt4.44□□□□□ -1.7
RPN11P43588 RPO21YDL140C 5202 nt4.44□□□□□ -1.7
RPN11P43588 KTR7YIL085C 1554 nt4.44□□□□□ -1.7
RPN11P43588 YCR101CYCR101C 549 nt4.43□□□□□ -1.7
RPN11P43588 SPR28YDR218C 1272 nt4.43□□□□□ -1.7
RPN11P43588 YER084WYER084W 387 nt4.43□□□□□ -1.7
RPN11P43588 PRE4YFR050C 801 nt4.43□□□□□ -1.7
RPN11P43588 TMA19YKL056C 504 nt4.43□□□□□ -1.7
RPN11P43588 POP8YBL018C 402 nt4.43□□□□□ -1.7
RPN11P43588 RPS10BYMR230W 318 nt4.43□□□□□ -1.7
RPN11P43588 SIW14YNL032W 846 nt4.43□□□□□ -1.7
RPN11P43588 NRK1YNL129W 723 nt4.43□□□□□ -1.7
RPN11P43588 YNR063WYNR063W 1824 nt4.43□□□□□ -1.7
RPN11P43588 VAS1YGR094W 3315 nt4.43□□□□□ -1.7
RPN11P43588 snR7-LsnR7-L 214 nt4.42□□□□□ -1.7
RPN11P43588 ESF1YDR365C 1887 nt4.42□□□□□ -1.7
RPN11P43588 SPT15YER148W 723 nt4.42□□□□□ -1.7
RPN11P43588 NPY1YGL067W 1155 nt4.42□□□□□ -1.7
RPN11P43588 ARC15YIL062C 465 nt4.42□□□□□ -1.7
RPN11P43588 IDS2YJL146W 1410 nt4.42□□□□□ -1.7
RPN11P43588 TDA7YNL176C 1911 nt4.42□□□□□ -1.7
RPN11P43588 PHO84YML123C 1764 nt4.42□□□□□ -1.7
RPN11P43588 FAA1YOR317W 2103 nt4.42□□□□□ -1.7
RPN11P43588 PEX29YDR479C 1665 nt4.41□□□□□ -1.7
RPN11P43588 YLR345WYLR345W 1530 nt4.41□□□□□ -1.7
RPN11P43588 SEG2YKL105C 3399 nt4.41□□□□□ -1.7
RPN11P43588 NUS1YDL193W 1128 nt4.41□□□□□ -1.7
RPN11P43588 YGL193CYGL193C 312 nt4.41□□□□□ -1.7
RPN11P43588 GCD7YLR291C 1146 nt4.41□□□□□ -1.7
RPN11P43588 COG5YNL051W 1212 nt4.41□□□□□ -1.7
RPN11P43588 YNL162W-AYNL162W-A 219 nt4.41□□□□□ -1.7
RPN11P43588 GRE1YPL223C 507 nt4.41□□□□□ -1.7
RPN11P43588 SPP381YBR152W 876 nt4.41□□□□□ -1.7
RPN11P43588 GSC2YGR032W 5688 nt4.41□□□□□ -1.7
RPN11P43588 TAF8YML114C 1533 nt4.41□□□□□ -1.7
RPN11P43588 ADE6YGR061C 4077 nt4.41□□□□□ -1.7
RPN11P43588 GPB1YOR371C 2694 nt4.4□□□□□ -1.7
RPN11P43588 RRP8YDR083W 1179 nt4.4□□□□□ -1.71
RPN11P43588 Q0144Q0144 330 nt4.4□□□□□ -1.71
RPN11P43588 SAW1YAL027W 786 nt4.4□□□□□ -1.71
RPN11P43588 YLR125WYLR125W 411 nt4.4□□□□□ -1.71
RPN11P43588 EAF7YNL136W 1278 nt4.4□□□□□ -1.71
RPN11P43588 SSU72YNL222W 621 nt4.4□□□□□ -1.71
RPN11P43588 PKH1YDR490C 2301 nt4.4□□□□□ -1.71
RPN11P43588 HSP82YPL240C 2130 nt4.4□□□□□ -1.71
RPN11P43588 RAD2YGR258C 3096 nt4.4□□□□□ -1.71
RPN11P43588 DTD1YDL219W 453 nt4.39□□□□□ -1.71
RPN11P43588 CTH1YDR151C 978 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)DtK(UUU)D 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)G1tK(UUU)G1 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)G2tK(UUU)G2 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)KtK(UUU)K 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)LtK(UUU)L 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)OtK(UUU)O 73 nt4.39□□□□□ -1.71
RPN11P43588 tK(UUU)PtK(UUU)P 73 nt4.39□□□□□ -1.71
RPN11P43588 CDC8YJR057W 651 nt4.39□□□□□ -1.71
RPN11P43588 ECM4YKR076W 1113 nt4.39□□□□□ -1.71
RPN11P43588 YLR366WYLR366W 306 nt4.39□□□□□ -1.71
RPN11P43588 ERD2YBL040C 660 nt4.39□□□□□ -1.71
RPN11P43588 YMR315WYMR315W 1050 nt4.39□□□□□ -1.71
RPN11P43588 YBL062WYBL062W 381 nt4.39□□□□□ -1.71
RPN11P43588 WRS1YOL097C 1299 nt4.39□□□□□ -1.71
RPN11P43588 BTS1YPL069C 1008 nt4.39□□□□□ -1.71
RPN11P43588 LAP3YNL239W 1365 nt4.39□□□□□ -1.71
RPN11P43588 DBP5YOR046C 1449 nt4.38□□□□□ -1.71
RPN11P43588 MEF2YJL102W 2460 nt4.38□□□□□ -1.71
RPN11P43588 PEP5YMR231W 3090 nt4.38□□□□□ -1.71
RPN11P43588 FZO1YBR179C 2568 nt4.38□□□□□ -1.71
RPN11P43588 FAA3YIL009W 2085 nt4.38□□□□□ -1.71
RPN11P43588 BUD26YDR241W 288 nt4.38□□□□□ -1.71
RPN11P43588 BMH1YER177W 804 nt4.38□□□□□ -1.71
RPN11P43588 YIL025CYIL025C 375 nt4.38□□□□□ -1.71
RPN11P43588 GAB1YLR459W 1185 nt4.38□□□□□ -1.71
RPN11P43588 YOL162WYOL162W 648 nt4.38□□□□□ -1.71
RPN11P43588 SUT2YPR009W 807 nt4.38□□□□□ -1.71
RPN11P43588 ECM8YBR076W 1065 nt4.38□□□□□ -1.71
RPN11P43588 ATG2YNL242W 4779 nt4.38□□□□□ -1.71
RPN11P43588 DIP2YLR129W 2832 nt4.37□□□□□ -1.71
RPN11P43588 TPA1YER049W 1935 nt4.37□□□□□ -1.71
RPN11P43588 SSA2YLL024C 1920 nt4.37□□□□□ -1.71
RPN11P43588 YCL068CYCL068C 783 nt4.37□□□□□ -1.71
RPN11P43588 LPP1YDR503C 825 nt4.37□□□□□ -1.71
RPN11P43588 MRPL16YBL038W 699 nt4.37□□□□□ -1.71
RPN11P43588 IZH4YOL101C 939 nt4.37□□□□□ -1.71
RPN11P43588 RSC1YGR056W 2787 nt4.37□□□□□ -1.71
RPN11P43588 KAP114YGL241W 3015 nt4.37□□□□□ -1.71
RPN11P43588 NHP10YDL002C 612 nt4.36□□□□□ -1.71
RPN11P43588 APC11YDL008W 498 nt4.36□□□□□ -1.71
RPN11P43588 YDL186WYDL186W 834 nt4.36□□□□□ -1.71
RPN11P43588 SUI2YJR007W 915 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms