Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zswim3Q8CFL8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zswim3Q8CFL8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Gm27275-201ENSMUST00000184318 272 ntBASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zswim3Q8CFL8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zswim3Q8CFL8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Gm6576-201ENSMUST00000169678 883 ntBASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Zswim3Q8CFL8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zswim3Q8CFL8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.43■■□□□ 1.02
Zswim3Q8CFL8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zswim3Q8CFL8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zswim3Q8CFL8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zswim3Q8CFL8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zswim3Q8CFL8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Zswim3Q8CFL8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Zswim3Q8CFL8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Gm5643-201ENSMUST00000117081 966 ntBASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zswim3Q8CFL8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zswim3Q8CFL8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zswim3Q8CFL8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zswim3Q8CFL8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zswim3Q8CFL8 Gm715-201ENSMUST00000117865 831 ntBASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zswim3Q8CFL8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zswim3Q8CFL8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms