Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6n-5A0A075B621 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6n-5A0A075B621 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6n-5A0A075B621 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6n-5A0A075B621 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6n-5A0A075B621 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-5A0A075B621 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6n-5A0A075B621 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Scarna2-201ENSMUST00000157560 414 ntBASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Gm16437-201ENSMUST00000025669 507 ntBASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-5A0A075B621 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trav6n-5A0A075B621 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-5A0A075B621 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-5A0A075B621 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms