Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.6■□□□□ 0.25
CMC4P56277 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CMC4P56277 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.6■□□□□ 0.25
CMC4P56277 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CMC4P56277 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMC4P56277 AL499627.2-201ENST00000606283 725 ntBASIC16.6■□□□□ 0.25
CMC4P56277 AC011298.3-201ENST00000615796 283 ntBASIC16.6■□□□□ 0.25
CMC4P56277 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CMC4P56277 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.6■□□□□ 0.25
CMC4P56277 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CMC4P56277 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CMC4P56277 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CMC4P56277 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CMC4P56277 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CMC4P56277 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CMC4P56277 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.59■□□□□ 0.25
CMC4P56277 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.59■□□□□ 0.25
CMC4P56277 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.59■□□□□ 0.25
CMC4P56277 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.59■□□□□ 0.25
CMC4P56277 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMC4P56277 AC079630.1-202ENST00000618127 1840 ntBASIC16.59■□□□□ 0.25
CMC4P56277 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CMC4P56277 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CMC4P56277 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CMC4P56277 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 UNC93B3-201ENST00000308076 687 ntBASIC16.58■□□□□ 0.24
CMC4P56277 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CMC4P56277 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CMC4P56277 pRNA.6-201ENST00000610482 90 ntBASIC16.58■□□□□ 0.24
CMC4P56277 pRNA.5-201ENST00000612139 90 ntBASIC16.58■□□□□ 0.24
CMC4P56277 pRNA.11-201ENST00000618423 90 ntBASIC16.58■□□□□ 0.24
CMC4P56277 pRNA.13-201ENST00000619112 90 ntBASIC16.58■□□□□ 0.24
CMC4P56277 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CMC4P56277 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CMC4P56277 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 ANOS2P-203ENST00000472227 1816 ntBASIC16.58■□□□□ 0.24
CMC4P56277 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMC4P56277 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
CMC4P56277 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CMC4P56277 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CMC4P56277 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMC4P56277 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMC4P56277 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMC4P56277 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.57■□□□□ 0.24
CMC4P56277 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.57■□□□□ 0.24
CMC4P56277 AC133561.4-201ENST00000566112 224 ntBASIC16.57■□□□□ 0.24
CMC4P56277 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CMC4P56277 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CMC4P56277 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.57■□□□□ 0.24
CMC4P56277 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.57■□□□□ 0.24
CMC4P56277 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
CMC4P56277 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.56■□□□□ 0.24
CMC4P56277 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.56■□□□□ 0.24
CMC4P56277 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CMC4P56277 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CMC4P56277 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.56■□□□□ 0.24
CMC4P56277 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.56■□□□□ 0.24
CMC4P56277 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.56■□□□□ 0.24
CMC4P56277 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 AL139246.5-201ENST00000606645 996 ntBASIC16.56■□□□□ 0.24
CMC4P56277 AL136162.1-201ENST00000607711 1078 ntBASIC16.56■□□□□ 0.24
CMC4P56277 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.56■□□□□ 0.24
CMC4P56277 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.56■□□□□ 0.24
CMC4P56277 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.56■□□□□ 0.24
CMC4P56277 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CMC4P56277 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CMC4P56277 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.55■□□□□ 0.24
CMC4P56277 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMC4P56277 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMC4P56277 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.55■□□□□ 0.24
CMC4P56277 AC096631.2-201ENST00000436136 790 ntBASIC16.55■□□□□ 0.24
CMC4P56277 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.55■□□□□ 0.24
CMC4P56277 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.55■□□□□ 0.24
CMC4P56277 MIR3181-201ENST00000578512 73 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms