Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rbfox1Q9JJ43 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rbfox1Q9JJ43 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rbfox1Q9JJ43 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.14■■□□□ 1.13
Rbfox1Q9JJ43 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.14■■□□□ 1.13
Rbfox1Q9JJ43 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rbfox1Q9JJ43 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rbfox1Q9JJ43 Zxda-201ENSMUST00000117281 2621 ntBASIC22.11■■□□□ 1.13
Rbfox1Q9JJ43 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rbfox1Q9JJ43 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rbfox1Q9JJ43 Gm25262-201ENSMUST00000174934 133 ntBASIC22.09■■□□□ 1.13
Rbfox1Q9JJ43 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Rbfox1Q9JJ43 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rbfox1Q9JJ43 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rbfox1Q9JJ43 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rbfox1Q9JJ43 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Rbfox1Q9JJ43 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rbfox1Q9JJ43 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rbfox1Q9JJ43 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbfox1Q9JJ43 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rbfox1Q9JJ43 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbfox1Q9JJ43 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rbfox1Q9JJ43 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rbfox1Q9JJ43 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rbfox1Q9JJ43 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rbfox1Q9JJ43 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.95■■□□□ 1.1
Rbfox1Q9JJ43 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rbfox1Q9JJ43 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rbfox1Q9JJ43 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rbfox1Q9JJ43 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Rbfox1Q9JJ43 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rbfox1Q9JJ43 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.92■■□□□ 1.1
Rbfox1Q9JJ43 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rbfox1Q9JJ43 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rbfox1Q9JJ43 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rbfox1Q9JJ43 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rbfox1Q9JJ43 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rbfox1Q9JJ43 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rbfox1Q9JJ43 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.89■■□□□ 1.09
Rbfox1Q9JJ43 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rbfox1Q9JJ43 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rbfox1Q9JJ43 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rbfox1Q9JJ43 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rbfox1Q9JJ43 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rbfox1Q9JJ43 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rbfox1Q9JJ43 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rbfox1Q9JJ43 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rbfox1Q9JJ43 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rbfox1Q9JJ43 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rbfox1Q9JJ43 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.83■■□□□ 1.09
Rbfox1Q9JJ43 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rbfox1Q9JJ43 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rbfox1Q9JJ43 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.8■■□□□ 1.08
Rbfox1Q9JJ43 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rbfox1Q9JJ43 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.79■■□□□ 1.08
Rbfox1Q9JJ43 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rbfox1Q9JJ43 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.78■■□□□ 1.08
Rbfox1Q9JJ43 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rbfox1Q9JJ43 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rbfox1Q9JJ43 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rbfox1Q9JJ43 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rbfox1Q9JJ43 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rbfox1Q9JJ43 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rbfox1Q9JJ43 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.74■■□□□ 1.07
Rbfox1Q9JJ43 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rbfox1Q9JJ43 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rbfox1Q9JJ43 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Gm27322-201ENSMUST00000184007 104 ntBASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rbfox1Q9JJ43 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbfox1Q9JJ43 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rbfox1Q9JJ43 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbfox1Q9JJ43 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbfox1Q9JJ43 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbfox1Q9JJ43 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbfox1Q9JJ43 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rbfox1Q9JJ43 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbfox1Q9JJ43 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rbfox1Q9JJ43 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rbfox1Q9JJ43 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rbfox1Q9JJ43 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rbfox1Q9JJ43 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.61■■□□□ 1.05
Rbfox1Q9JJ43 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rbfox1Q9JJ43 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.6■■□□□ 1.05
Rbfox1Q9JJ43 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rbfox1Q9JJ43 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
Rbfox1Q9JJ43 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rbfox1Q9JJ43 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rbfox1Q9JJ43 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rbfox1Q9JJ43 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rbfox1Q9JJ43 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rbfox1Q9JJ43 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rbfox1Q9JJ43 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rbfox1Q9JJ43 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.55■■□□□ 1.04
Rbfox1Q9JJ43 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rbfox1Q9JJ43 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.53■■□□□ 1.04
Rbfox1Q9JJ43 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms