Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.29■■□□□ 1.16
2210010C04RikQ9CPN9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
2210010C04RikQ9CPN9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
2210010C04RikQ9CPN9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
2210010C04RikQ9CPN9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
2210010C04RikQ9CPN9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
2210010C04RikQ9CPN9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
2210010C04RikQ9CPN9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
2210010C04RikQ9CPN9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.24■■□□□ 1.15
2210010C04RikQ9CPN9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
2210010C04RikQ9CPN9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.22■■□□□ 1.15
2210010C04RikQ9CPN9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
2210010C04RikQ9CPN9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
2210010C04RikQ9CPN9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
2210010C04RikQ9CPN9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
2210010C04RikQ9CPN9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.2■■□□□ 1.14
2210010C04RikQ9CPN9 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.2■■□□□ 1.14
2210010C04RikQ9CPN9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
2210010C04RikQ9CPN9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
2210010C04RikQ9CPN9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
2210010C04RikQ9CPN9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
2210010C04RikQ9CPN9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
2210010C04RikQ9CPN9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
2210010C04RikQ9CPN9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
2210010C04RikQ9CPN9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
2210010C04RikQ9CPN9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
2210010C04RikQ9CPN9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
2210010C04RikQ9CPN9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
2210010C04RikQ9CPN9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
2210010C04RikQ9CPN9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
2210010C04RikQ9CPN9 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.1■■□□□ 1.13
2210010C04RikQ9CPN9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
2210010C04RikQ9CPN9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
2210010C04RikQ9CPN9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
2210010C04RikQ9CPN9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
2210010C04RikQ9CPN9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
2210010C04RikQ9CPN9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
2210010C04RikQ9CPN9 Mipep-204ENSMUST00000225043 1548 ntBASIC22.06■■□□□ 1.12
2210010C04RikQ9CPN9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
2210010C04RikQ9CPN9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
2210010C04RikQ9CPN9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
2210010C04RikQ9CPN9 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.02■■□□□ 1.12
2210010C04RikQ9CPN9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
2210010C04RikQ9CPN9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
2210010C04RikQ9CPN9 Gm8109-201ENSMUST00000194076 746 ntBASIC22.01■■□□□ 1.11
2210010C04RikQ9CPN9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.01■■□□□ 1.11
2210010C04RikQ9CPN9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22■■□□□ 1.11
2210010C04RikQ9CPN9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
2210010C04RikQ9CPN9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
2210010C04RikQ9CPN9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
2210010C04RikQ9CPN9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
2210010C04RikQ9CPN9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
2210010C04RikQ9CPN9 Gm27322-201ENSMUST00000184007 104 ntBASIC21.98■■□□□ 1.11
2210010C04RikQ9CPN9 Gm26115-201ENSMUST00000175605 87 ntBASIC21.97■■□□□ 1.11
2210010C04RikQ9CPN9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
2210010C04RikQ9CPN9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.97■■□□□ 1.11
2210010C04RikQ9CPN9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.96■■□□□ 1.11
2210010C04RikQ9CPN9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
2210010C04RikQ9CPN9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
2210010C04RikQ9CPN9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
2210010C04RikQ9CPN9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
2210010C04RikQ9CPN9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
2210010C04RikQ9CPN9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.93■■□□□ 1.1
2210010C04RikQ9CPN9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
2210010C04RikQ9CPN9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.92■■□□□ 1.1
2210010C04RikQ9CPN9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
2210010C04RikQ9CPN9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
2210010C04RikQ9CPN9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
2210010C04RikQ9CPN9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210010C04RikQ9CPN9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.9■■□□□ 1.1
2210010C04RikQ9CPN9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210010C04RikQ9CPN9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
2210010C04RikQ9CPN9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.9■■□□□ 1.1
2210010C04RikQ9CPN9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
2210010C04RikQ9CPN9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
2210010C04RikQ9CPN9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
2210010C04RikQ9CPN9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
2210010C04RikQ9CPN9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
2210010C04RikQ9CPN9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
2210010C04RikQ9CPN9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
2210010C04RikQ9CPN9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.8■■□□□ 1.08
2210010C04RikQ9CPN9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
2210010C04RikQ9CPN9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
2210010C04RikQ9CPN9 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.78■■□□□ 1.08
2210010C04RikQ9CPN9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
2210010C04RikQ9CPN9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
2210010C04RikQ9CPN9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
2210010C04RikQ9CPN9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
2210010C04RikQ9CPN9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
2210010C04RikQ9CPN9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
2210010C04RikQ9CPN9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
2210010C04RikQ9CPN9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
2210010C04RikQ9CPN9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
2210010C04RikQ9CPN9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
2210010C04RikQ9CPN9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
2210010C04RikQ9CPN9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
2210010C04RikQ9CPN9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
2210010C04RikQ9CPN9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
2210010C04RikQ9CPN9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
2210010C04RikQ9CPN9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms