Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.61■■■□□ 2.17
Sgms1Q8VCQ6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sgms1Q8VCQ6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Sgms1Q8VCQ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Sgms1Q8VCQ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sgms1Q8VCQ6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sgms1Q8VCQ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Sgms1Q8VCQ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Sgms1Q8VCQ6 Gm27322-201ENSMUST00000184007 104 ntBASIC28.49■■■□□ 2.15
Sgms1Q8VCQ6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Sgms1Q8VCQ6 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.44■■■□□ 2.14
Sgms1Q8VCQ6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sgms1Q8VCQ6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Sgms1Q8VCQ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Sgms1Q8VCQ6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sgms1Q8VCQ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.32■■■□□ 2.12
Sgms1Q8VCQ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sgms1Q8VCQ6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sgms1Q8VCQ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Sgms1Q8VCQ6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Sgms1Q8VCQ6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
Sgms1Q8VCQ6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Sgms1Q8VCQ6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sgms1Q8VCQ6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.22■■■□□ 2.11
Sgms1Q8VCQ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.22■■■□□ 2.11
Sgms1Q8VCQ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Sgms1Q8VCQ6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sgms1Q8VCQ6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sgms1Q8VCQ6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sgms1Q8VCQ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sgms1Q8VCQ6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sgms1Q8VCQ6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sgms1Q8VCQ6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sgms1Q8VCQ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sgms1Q8VCQ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sgms1Q8VCQ6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sgms1Q8VCQ6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Sgms1Q8VCQ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sgms1Q8VCQ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sgms1Q8VCQ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sgms1Q8VCQ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.01■■■□□ 2.07
Sgms1Q8VCQ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sgms1Q8VCQ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sgms1Q8VCQ6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.96■■■□□ 2.07
Sgms1Q8VCQ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sgms1Q8VCQ6 Gm24804-201ENSMUST00000174982 85 ntBASIC27.95■■■□□ 2.06
Sgms1Q8VCQ6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sgms1Q8VCQ6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sgms1Q8VCQ6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sgms1Q8VCQ6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sgms1Q8VCQ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sgms1Q8VCQ6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.84■■■□□ 2.05
Sgms1Q8VCQ6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sgms1Q8VCQ6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Sgms1Q8VCQ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Peli2-204ENSMUST00000226513 1320 ntBASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sgms1Q8VCQ6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
Sgms1Q8VCQ6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.78■■■□□ 2.04
Sgms1Q8VCQ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sgms1Q8VCQ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Sgms1Q8VCQ6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sgms1Q8VCQ6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Sgms1Q8VCQ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.74■■■□□ 2.03
Sgms1Q8VCQ6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms