Protein–RNA interactions for Protein: Q8VBS7

Vmn1r42, Vomeronasal type-1 receptor 42, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r42Q8VBS7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vmn1r42Q8VBS7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.65■■□□□ 1.38
Vmn1r42Q8VBS7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Vmn1r42Q8VBS7 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.62■■□□□ 1.37
Vmn1r42Q8VBS7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.62■■□□□ 1.37
Vmn1r42Q8VBS7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vmn1r42Q8VBS7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.57■■□□□ 1.36
Vmn1r42Q8VBS7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.55■■□□□ 1.36
Vmn1r42Q8VBS7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vmn1r42Q8VBS7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vmn1r42Q8VBS7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vmn1r42Q8VBS7 Gm24804-201ENSMUST00000174982 85 ntBASIC23.52■■□□□ 1.36
Vmn1r42Q8VBS7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vmn1r42Q8VBS7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r42Q8VBS7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vmn1r42Q8VBS7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Vmn1r42Q8VBS7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Vmn1r42Q8VBS7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vmn1r42Q8VBS7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.45■■□□□ 1.35
Vmn1r42Q8VBS7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.44■■□□□ 1.34
Vmn1r42Q8VBS7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r42Q8VBS7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r42Q8VBS7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vmn1r42Q8VBS7 Mipep-204ENSMUST00000225043 1548 ntBASIC23.42■■□□□ 1.34
Vmn1r42Q8VBS7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.41■■□□□ 1.34
Vmn1r42Q8VBS7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Vmn1r42Q8VBS7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vmn1r42Q8VBS7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Vmn1r42Q8VBS7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r42Q8VBS7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vmn1r42Q8VBS7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Vmn1r42Q8VBS7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Vmn1r42Q8VBS7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Vmn1r42Q8VBS7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Vmn1r42Q8VBS7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Vmn1r42Q8VBS7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Vmn1r42Q8VBS7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Vmn1r42Q8VBS7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vmn1r42Q8VBS7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.29■■□□□ 1.32
Vmn1r42Q8VBS7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r42Q8VBS7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Vmn1r42Q8VBS7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Vmn1r42Q8VBS7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vmn1r42Q8VBS7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Vmn1r42Q8VBS7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r42Q8VBS7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r42Q8VBS7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r42Q8VBS7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Vmn1r42Q8VBS7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.23■■□□□ 1.31
Vmn1r42Q8VBS7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vmn1r42Q8VBS7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vmn1r42Q8VBS7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vmn1r42Q8VBS7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Vmn1r42Q8VBS7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Vmn1r42Q8VBS7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vmn1r42Q8VBS7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.18■■□□□ 1.3
Vmn1r42Q8VBS7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Vmn1r42Q8VBS7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Vmn1r42Q8VBS7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vmn1r42Q8VBS7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vmn1r42Q8VBS7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vmn1r42Q8VBS7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r42Q8VBS7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r42Q8VBS7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r42Q8VBS7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r42Q8VBS7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r42Q8VBS7 Peli2-204ENSMUST00000226513 1320 ntBASIC23.09■■□□□ 1.29
Vmn1r42Q8VBS7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Vmn1r42Q8VBS7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.08■■□□□ 1.29
Vmn1r42Q8VBS7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Vmn1r42Q8VBS7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r42Q8VBS7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r42Q8VBS7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r42Q8VBS7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Vmn1r42Q8VBS7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r42Q8VBS7 Gm16148-201ENSMUST00000119653 893 ntBASIC23.03■■□□□ 1.28
Vmn1r42Q8VBS7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vmn1r42Q8VBS7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r42Q8VBS7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r42Q8VBS7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.02■■□□□ 1.28
Vmn1r42Q8VBS7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Vmn1r42Q8VBS7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r42Q8VBS7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r42Q8VBS7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r42Q8VBS7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r42Q8VBS7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Vmn1r42Q8VBS7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vmn1r42Q8VBS7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Vmn1r42Q8VBS7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r42Q8VBS7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r42Q8VBS7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r42Q8VBS7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r42Q8VBS7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r42Q8VBS7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.95■■□□□ 1.26
Vmn1r42Q8VBS7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r42Q8VBS7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r42Q8VBS7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r42Q8VBS7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r42Q8VBS7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Vmn1r42Q8VBS7 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms