Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim36Q80WG7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim36Q80WG7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.81■■□□□ 1.56
Trim36Q80WG7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim36Q80WG7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim36Q80WG7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.74■■□□□ 1.55
Trim36Q80WG7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim36Q80WG7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim36Q80WG7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim36Q80WG7 Gm24804-201ENSMUST00000174982 85 ntBASIC24.71■■□□□ 1.55
Trim36Q80WG7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Trim36Q80WG7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
Trim36Q80WG7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.66■■□□□ 1.54
Trim36Q80WG7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim36Q80WG7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim36Q80WG7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim36Q80WG7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim36Q80WG7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.64■■□□□ 1.54
Trim36Q80WG7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim36Q80WG7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim36Q80WG7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim36Q80WG7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim36Q80WG7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim36Q80WG7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim36Q80WG7 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.62■■□□□ 1.53
Trim36Q80WG7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim36Q80WG7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim36Q80WG7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim36Q80WG7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim36Q80WG7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim36Q80WG7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim36Q80WG7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim36Q80WG7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Trim36Q80WG7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.58■■□□□ 1.53
Trim36Q80WG7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Trim36Q80WG7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.54■■□□□ 1.52
Trim36Q80WG7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Trim36Q80WG7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim36Q80WG7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim36Q80WG7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Trim36Q80WG7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim36Q80WG7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.48■■□□□ 1.51
Trim36Q80WG7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Trim36Q80WG7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim36Q80WG7 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.45■■□□□ 1.5
Trim36Q80WG7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim36Q80WG7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim36Q80WG7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim36Q80WG7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim36Q80WG7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim36Q80WG7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim36Q80WG7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim36Q80WG7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trim36Q80WG7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim36Q80WG7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim36Q80WG7 Mipep-204ENSMUST00000225043 1548 ntBASIC24.34■■□□□ 1.49
Trim36Q80WG7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim36Q80WG7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim36Q80WG7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim36Q80WG7 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.32■■□□□ 1.48
Trim36Q80WG7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim36Q80WG7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim36Q80WG7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim36Q80WG7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim36Q80WG7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim36Q80WG7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim36Q80WG7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim36Q80WG7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.27■■□□□ 1.48
Trim36Q80WG7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim36Q80WG7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim36Q80WG7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim36Q80WG7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim36Q80WG7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim36Q80WG7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim36Q80WG7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim36Q80WG7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Trim36Q80WG7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Trim36Q80WG7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Trim36Q80WG7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.2■■□□□ 1.46
Trim36Q80WG7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Trim36Q80WG7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Trim36Q80WG7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim36Q80WG7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Trim36Q80WG7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim36Q80WG7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Trim36Q80WG7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim36Q80WG7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim36Q80WG7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim36Q80WG7 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.13■■□□□ 1.45
Trim36Q80WG7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trim36Q80WG7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trim36Q80WG7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trim36Q80WG7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trim36Q80WG7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trim36Q80WG7 Zxda-201ENSMUST00000117281 2621 ntBASIC24.1■■□□□ 1.45
Trim36Q80WG7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Trim36Q80WG7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trim36Q80WG7 Zfp131-205ENSMUST00000223812 663 ntBASIC24.07■■□□□ 1.44
Trim36Q80WG7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Trim36Q80WG7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms