Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Nhej1Q3KNJ2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Nhej1Q3KNJ2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Nhej1Q3KNJ2 Mipep-204ENSMUST00000225043 1548 ntBASIC27.82■■■□□ 2.04
Nhej1Q3KNJ2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nhej1Q3KNJ2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nhej1Q3KNJ2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Nhej1Q3KNJ2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
Nhej1Q3KNJ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Nhej1Q3KNJ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Nhej1Q3KNJ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Nhej1Q3KNJ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Nhej1Q3KNJ2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.74■■■□□ 2.03
Nhej1Q3KNJ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Nhej1Q3KNJ2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Nhej1Q3KNJ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Nhej1Q3KNJ2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Nhej1Q3KNJ2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nhej1Q3KNJ2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Nhej1Q3KNJ2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.65■■■□□ 2.02
Nhej1Q3KNJ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Nhej1Q3KNJ2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Nhej1Q3KNJ2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Nhej1Q3KNJ2 Gm25262-201ENSMUST00000174934 133 ntBASIC27.6■■■□□ 2.01
Nhej1Q3KNJ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.57■■■□□ 2
Nhej1Q3KNJ2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Nhej1Q3KNJ2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Nhej1Q3KNJ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Nhej1Q3KNJ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Nhej1Q3KNJ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Nhej1Q3KNJ2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Nhej1Q3KNJ2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.51■■□□□ 1.99
Nhej1Q3KNJ2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Nhej1Q3KNJ2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Nhej1Q3KNJ2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Nhej1Q3KNJ2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Nhej1Q3KNJ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nhej1Q3KNJ2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nhej1Q3KNJ2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Nhej1Q3KNJ2 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.45■■□□□ 1.98
Nhej1Q3KNJ2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Nhej1Q3KNJ2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Nhej1Q3KNJ2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
Nhej1Q3KNJ2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Nhej1Q3KNJ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Nhej1Q3KNJ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Nhej1Q3KNJ2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Nhej1Q3KNJ2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Nhej1Q3KNJ2 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.38■■□□□ 1.97
Nhej1Q3KNJ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.38■■□□□ 1.97
Nhej1Q3KNJ2 Zxda-201ENSMUST00000117281 2621 ntBASIC27.37■■□□□ 1.97
Nhej1Q3KNJ2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Nhej1Q3KNJ2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Nhej1Q3KNJ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.33■■□□□ 1.97
Nhej1Q3KNJ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Nhej1Q3KNJ2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.29■■□□□ 1.96
Nhej1Q3KNJ2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
Nhej1Q3KNJ2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nhej1Q3KNJ2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.28■■□□□ 1.96
Nhej1Q3KNJ2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Nhej1Q3KNJ2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Nhej1Q3KNJ2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Nhej1Q3KNJ2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Nhej1Q3KNJ2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Nhej1Q3KNJ2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Nhej1Q3KNJ2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Nhej1Q3KNJ2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Nhej1Q3KNJ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.2■■□□□ 1.94
Nhej1Q3KNJ2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Nhej1Q3KNJ2 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.2■■□□□ 1.94
Nhej1Q3KNJ2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Nhej1Q3KNJ2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nhej1Q3KNJ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Nhej1Q3KNJ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.18■■□□□ 1.94
Nhej1Q3KNJ2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nhej1Q3KNJ2 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.15■■□□□ 1.94
Nhej1Q3KNJ2 Gm27322-201ENSMUST00000184007 104 ntBASIC27.14■■□□□ 1.94
Nhej1Q3KNJ2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Nhej1Q3KNJ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
Nhej1Q3KNJ2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
Nhej1Q3KNJ2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Nhej1Q3KNJ2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Nhej1Q3KNJ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Nhej1Q3KNJ2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Nhej1Q3KNJ2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Nhej1Q3KNJ2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Nhej1Q3KNJ2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Nhej1Q3KNJ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Nhej1Q3KNJ2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Nhej1Q3KNJ2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Nhej1Q3KNJ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Nhej1Q3KNJ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.03■■□□□ 1.92
Nhej1Q3KNJ2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Nhej1Q3KNJ2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Nhej1Q3KNJ2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Nhej1Q3KNJ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Nhej1Q3KNJ2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Nhej1Q3KNJ2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Nhej1Q3KNJ2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Nhej1Q3KNJ2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms