Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 DIC1YLR348C 897 nt12.85□□□□□ -0.35
SPB4P25808 PAU16YKL224C 372 nt12.84□□□□□ -0.35
SPB4P25808 TIM23YNR017W 669 nt12.84□□□□□ -0.35
SPB4P25808 TOM20YGR082W 552 nt12.83□□□□□ -0.36
SPB4P25808 BOP3YNL042W 1191 nt12.81□□□□□ -0.36
SPB4P25808 YNL195CYNL195C 786 nt12.8□□□□□ -0.36
SPB4P25808 tL(GAG)GtL(GAG)G 82 nt12.79□□□□□ -0.36
SPB4P25808 ABZ2YMR289W 1125 nt12.78□□□□□ -0.36
SPB4P25808 BUR6YER159C 429 nt12.76□□□□□ -0.37
SPB4P25808 YFR018CYFR018C 1092 nt12.76□□□□□ -0.37
SPB4P25808 RRT5YFR032C 870 nt12.76□□□□□ -0.37
SPB4P25808 SBA1YKL117W 651 nt12.76□□□□□ -0.37
SPB4P25808 YLR179CYLR179C 606 nt12.76□□□□□ -0.37
SPB4P25808 PRE6YOL038W 765 nt12.75□□□□□ -0.37
SPB4P25808 PAB1YER165W 1734 nt12.74□□□□□ -0.37
SPB4P25808 YIH1YCR059C 777 nt12.73□□□□□ -0.37
SPB4P25808 RNQ1YCL028W 1218 nt12.73□□□□□ -0.37
SPB4P25808 AI5_BETAQ0075 1065 nt12.71□□□□□ -0.37
SPB4P25808 YJL118WYJL118W 660 nt12.71□□□□□ -0.37
SPB4P25808 NCP1YHR042W 2076 nt12.71□□□□□ -0.38
SPB4P25808 YPR064WYPR064W 420 nt12.7□□□□□ -0.38
SPB4P25808 UME6YDR207C 2511 nt12.68□□□□□ -0.38
SPB4P25808 BIO4YNR057C 714 nt12.67□□□□□ -0.38
SPB4P25808 FRE6YLL051C 2139 nt12.66□□□□□ -0.38
SPB4P25808 YLL053CYLL053C 459 nt12.65□□□□□ -0.38
SPB4P25808 WSC2YNL283C 1512 nt12.65□□□□□ -0.38
SPB4P25808 SIM1YIL123W 1431 nt12.64□□□□□ -0.39
SPB4P25808 TAD3YLR316C 969 nt12.63□□□□□ -0.39
SPB4P25808 YFL066CYFL066C 1179 nt12.57□□□□□ -0.4
SPB4P25808 AHT1YHR093W 549 nt12.57□□□□□ -0.4
SPB4P25808 BMT5YIL096C 1011 nt12.57□□□□□ -0.4
SPB4P25808 FTR1YER145C 1215 nt12.55□□□□□ -0.4
SPB4P25808 GAL1YBR020W 1587 nt12.53□□□□□ -0.4
SPB4P25808 BOR1YNL275W 1731 nt12.53□□□□□ -0.4
SPB4P25808 YIR018C-AYIR018C-A 138 nt12.51□□□□□ -0.41
SPB4P25808 SRN2YLR119W 642 nt12.51□□□□□ -0.41
SPB4P25808 TRM5YHR070W 1500 nt12.51□□□□□ -0.41
SPB4P25808 SPT8YLR055C 1809 nt12.5□□□□□ -0.41
SPB4P25808 YPL041CYPL041C 624 nt12.49□□□□□ -0.41
SPB4P25808 COG1YGL223C 1254 nt12.48□□□□□ -0.41
SPB4P25808 RDN37-1RDN37-1 5354 nt12.47□□□□□ -0.41
SPB4P25808 RDN37-2RDN37-2 5354 nt12.47□□□□□ -0.41
SPB4P25808 PEX25YPL112C 1185 nt12.46□□□□□ -0.41
SPB4P25808 ATF2YGR177C 1608 nt12.46□□□□□ -0.41
SPB4P25808 FTH1YBR207W 1398 nt12.45□□□□□ -0.42
SPB4P25808 YFL054CYFL054C 1941 nt12.45□□□□□ -0.42
SPB4P25808 NAT4YMR069W 858 nt12.43□□□□□ -0.42
SPB4P25808 YNL067W-AYNL067W-A 147 nt12.43□□□□□ -0.42
SPB4P25808 AQY1YPR192W 918 nt12.43□□□□□ -0.42
SPB4P25808 BDH1YAL060W 1149 nt12.41□□□□□ -0.42
SPB4P25808 STB1YNL309W 1263 nt12.4□□□□□ -0.42
SPB4P25808 YNL115CYNL115C 1935 nt12.4□□□□□ -0.42
SPB4P25808 YSP3YOR003W 1437 nt12.39□□□□□ -0.43
SPB4P25808 YDR524C-BYDR524C-B 201 nt12.37□□□□□ -0.43
SPB4P25808 GLK1YCL040W 1503 nt12.37□□□□□ -0.43
SPB4P25808 SPC25YER018C 666 nt12.36□□□□□ -0.43
SPB4P25808 CRR1YLR213C 1269 nt12.36□□□□□ -0.43
SPB4P25808 ERF2YLR246W 1080 nt12.36□□□□□ -0.43
SPB4P25808 YLR415CYLR415C 339 nt12.36□□□□□ -0.43
SPB4P25808 DDR2YOL052C-A 186 nt12.35□□□□□ -0.43
SPB4P25808 CCT4YDL143W 1587 nt12.35□□□□□ -0.43
SPB4P25808 VPS60YDR486C 690 nt12.33□□□□□ -0.44
SPB4P25808 YHM2YMR241W 945 nt12.32□□□□□ -0.44
SPB4P25808 ALG3YBL082C 1377 nt12.31□□□□□ -0.44
SPB4P25808 YFL067WYFL067W 528 nt12.31□□□□□ -0.44
SPB4P25808 RPM1RPM1 483 nt12.31□□□□□ -0.44
SPB4P25808 MIC10YCL057C-A 294 nt12.3□□□□□ -0.44
SPB4P25808 LYS4YDR234W 2082 nt12.3□□□□□ -0.44
SPB4P25808 GPI16YHR188C 1833 nt12.28□□□□□ -0.44
SPB4P25808 YDL086C-AYDL086C-A 435 nt12.28□□□□□ -0.44
SPB4P25808 MSF1YPR047W 1410 nt12.28□□□□□ -0.44
SPB4P25808 SNG1YGR197C 1644 nt12.27□□□□□ -0.44
SPB4P25808 HMT1YBR034C 1047 nt12.26□□□□□ -0.45
SPB4P25808 SWC5YBR231C 912 nt12.26□□□□□ -0.45
SPB4P25808 YTH1YPR107C 627 nt12.25□□□□□ -0.45
SPB4P25808 FEN2YCR028C 1539 nt12.24□□□□□ -0.45
SPB4P25808 THI74YDR438W 1113 nt12.24□□□□□ -0.45
SPB4P25808 ANP1YEL036C 1503 nt12.24□□□□□ -0.45
SPB4P25808 HSP60YLR259C 1719 nt12.23□□□□□ -0.45
SPB4P25808 SWE1YJL187C 2460 nt12.22□□□□□ -0.45
SPB4P25808 MIR1YJR077C 936 nt12.22□□□□□ -0.45
SPB4P25808 HEM12YDR047W 1089 nt12.21□□□□□ -0.45
SPB4P25808 YPL071CYPL071C 471 nt12.21□□□□□ -0.45
SPB4P25808 MCH5YOR306C 1566 nt12.21□□□□□ -0.46
SPB4P25808 ALG12YNR030W 1656 nt12.17□□□□□ -0.46
SPB4P25808 YDR510C-AYDR510C-A 117 nt12.17□□□□□ -0.46
SPB4P25808 VPS75YNL246W 795 nt12.17□□□□□ -0.46
SPB4P25808 YIR016WYIR016W 798 nt12.13□□□□□ -0.47
SPB4P25808 PUS5YLR165C 765 nt12.13□□□□□ -0.47
SPB4P25808 UTP6YDR449C 1323 nt12.12□□□□□ -0.47
SPB4P25808 YMR244WYMR244W 1068 nt12.12□□□□□ -0.47
SPB4P25808 BNS1YGR230W 414 nt12.1□□□□□ -0.47
SPB4P25808 PAU7YAR020C 168 nt12.1□□□□□ -0.47
SPB4P25808 ARP10YDR106W 855 nt12.09□□□□□ -0.47
SPB4P25808 DAT1YML113W 747 nt12.09□□□□□ -0.47
SPB4P25808 FHN1YGR131W 525 nt12.06□□□□□ -0.48
SPB4P25808 NAS6YGR232W 687 nt12.05□□□□□ -0.48
SPB4P25808 FAF1YIL019W 1041 nt12.05□□□□□ -0.48
SPB4P25808 YHR056W-AYHR056W-A 435 nt12.04□□□□□ -0.48
SPB4P25808 ATG17YLR423C 1254 nt12.04□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 63.3 ms