Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 CMP2YML057W 1815 nt11.21□□□□□ -0.62
RAD3P06839 YFR018CYFR018C 1092 nt11.2□□□□□ -0.62
RAD3P06839 tL(GAG)GtL(GAG)G 82 nt11.2□□□□□ -0.62
RAD3P06839 TIM23YNR017W 669 nt11.19□□□□□ -0.62
RAD3P06839 Q0182Q0182 405 nt11.18□□□□□ -0.62
RAD3P06839 DIC1YLR348C 897 nt11.17□□□□□ -0.62
RAD3P06839 PRP4YPR178W 1398 nt11.16□□□□□ -0.62
RAD3P06839 CRR1YLR213C 1269 nt11.16□□□□□ -0.62
RAD3P06839 ERF2YLR246W 1080 nt11.15□□□□□ -0.62
RAD3P06839 HSL7YBR133C 2484 nt11.12□□□□□ -0.63
RAD3P06839 BIO5YNR056C 1686 nt11.12□□□□□ -0.63
RAD3P06839 PAU16YKL224C 372 nt11.12□□□□□ -0.63
RAD3P06839 PBP1YGR178C 2169 nt11.11□□□□□ -0.63
RAD3P06839 DPS1YLL018C 1674 nt11.11□□□□□ -0.63
RAD3P06839 YHR056W-AYHR056W-A 435 nt11.11□□□□□ -0.63
RAD3P06839 RNQ1YCL028W 1218 nt11.11□□□□□ -0.63
RAD3P06839 YIH1YCR059C 777 nt11.1□□□□□ -0.63
RAD3P06839 RRT5YFR032C 870 nt11.09□□□□□ -0.63
RAD3P06839 CYT2YKL087C 675 nt11.09□□□□□ -0.63
RAD3P06839 YLR179CYLR179C 606 nt11.09□□□□□ -0.63
RAD3P06839 YPR064WYPR064W 420 nt11.09□□□□□ -0.63
RAD3P06839 RDN37-1RDN37-1 5354 nt11.07□□□□□ -0.64
RAD3P06839 RDN37-2RDN37-2 5354 nt11.07□□□□□ -0.64
RAD3P06839 YLL053CYLL053C 459 nt11.07□□□□□ -0.64
RAD3P06839 MIC10YCL057C-A 294 nt11.07□□□□□ -0.64
RAD3P06839 AHT1YHR093W 549 nt11.05□□□□□ -0.64
RAD3P06839 TAD3YLR316C 969 nt11.05□□□□□ -0.64
RAD3P06839 ATF2YGR177C 1608 nt11.04□□□□□ -0.64
RAD3P06839 WSC2YNL283C 1512 nt11.04□□□□□ -0.64
RAD3P06839 CCA1YER168C 1641 nt11.03□□□□□ -0.64
RAD3P06839 HEM12YDR047W 1089 nt11.03□□□□□ -0.64
RAD3P06839 PRE6YOL038W 765 nt11.02□□□□□ -0.65
RAD3P06839 SNG1YGR197C 1644 nt11□□□□□ -0.65
RAD3P06839 SBA1YKL117W 651 nt10.99□□□□□ -0.65
RAD3P06839 SNF1YDR477W 1902 nt10.98□□□□□ -0.65
RAD3P06839 BMT6YLR063W 1098 nt10.98□□□□□ -0.65
RAD3P06839 RAX1YOR301W 1308 nt10.98□□□□□ -0.65
RAD3P06839 AQY1YPR192W 918 nt10.97□□□□□ -0.65
RAD3P06839 FTR1YER145C 1215 nt10.95□□□□□ -0.66
RAD3P06839 YFL067WYFL067W 528 nt10.94□□□□□ -0.66
RAD3P06839 HEL2YDR266C 1920 nt10.93□□□□□ -0.66
RAD3P06839 GAL1YBR020W 1587 nt10.91□□□□□ -0.66
RAD3P06839 TRM5YHR070W 1500 nt10.91□□□□□ -0.66
RAD3P06839 PEX25YPL112C 1185 nt10.9□□□□□ -0.66
RAD3P06839 YSP3YOR003W 1437 nt10.86□□□□□ -0.67
RAD3P06839 BDH1YAL060W 1149 nt10.86□□□□□ -0.67
RAD3P06839 DDR2YOL052C-A 186 nt10.85□□□□□ -0.67
RAD3P06839 YKR005CYKR005C 1578 nt10.85□□□□□ -0.67
RAD3P06839 YFL066CYFL066C 1179 nt10.84□□□□□ -0.67
RAD3P06839 RDN25-1RDN25-1 3396 nt10.83□□□□□ -0.68
RAD3P06839 RDN25-2RDN25-2 3396 nt10.83□□□□□ -0.68
RAD3P06839 YAT1YAR035W 2064 nt10.83□□□□□ -0.68
RAD3P06839 YDL086C-AYDL086C-A 435 nt10.82□□□□□ -0.68
RAD3P06839 ANP1YEL036C 1503 nt10.81□□□□□ -0.68
RAD3P06839 SPC25YER018C 666 nt10.81□□□□□ -0.68
RAD3P06839 NDI1YML120C 1542 nt10.8□□□□□ -0.68
RAD3P06839 YLR415CYLR415C 339 nt10.79□□□□□ -0.68
RAD3P06839 NAT4YMR069W 858 nt10.79□□□□□ -0.68
RAD3P06839 AGP1YCL025C 1902 nt10.79□□□□□ -0.68
RAD3P06839 YNL115CYNL115C 1935 nt10.78□□□□□ -0.68
RAD3P06839 STB1YNL309W 1263 nt10.78□□□□□ -0.68
RAD3P06839 BNA2YJR078W 1362 nt10.77□□□□□ -0.69
RAD3P06839 MIC12YBR262C 321 nt10.76□□□□□ -0.69
RAD3P06839 CCT4YDL143W 1587 nt10.75□□□□□ -0.69
RAD3P06839 GPI16YHR188C 1833 nt10.73□□□□□ -0.69
RAD3P06839 IRC24YIR036C 792 nt10.71□□□□□ -0.69
RAD3P06839 YDR524C-BYDR524C-B 201 nt10.7□□□□□ -0.7
RAD3P06839 DUS1YML080W 1272 nt10.7□□□□□ -0.7
RAD3P06839 VPS75YNL246W 795 nt10.7□□□□□ -0.7
RAD3P06839 YCL074WYCL074W 927 nt10.69□□□□□ -0.7
RAD3P06839 MSF1YPR047W 1410 nt10.68□□□□□ -0.7
RAD3P06839 MIR1YJR077C 936 nt10.68□□□□□ -0.7
RAD3P06839 FEN2YCR028C 1539 nt10.68□□□□□ -0.7
RAD3P06839 VPS60YDR486C 690 nt10.66□□□□□ -0.7
RAD3P06839 YGR259CYGR259C 441 nt10.66□□□□□ -0.7
RAD3P06839 THI74YDR438W 1113 nt10.64□□□□□ -0.71
RAD3P06839 SWC5YBR231C 912 nt10.64□□□□□ -0.71
RAD3P06839 RIM8YGL045W 1629 nt10.64□□□□□ -0.71
RAD3P06839 SPT20YOL148C 1815 nt10.63□□□□□ -0.71
RAD3P06839 HHO1YPL127C 777 nt10.63□□□□□ -0.71
RAD3P06839 ALG3YBL082C 1377 nt10.61□□□□□ -0.71
RAD3P06839 YIR016WYIR016W 798 nt10.6□□□□□ -0.71
RAD3P06839 XDJ1YLR090W 1380 nt10.59□□□□□ -0.71
RAD3P06839 MET2YNL277W 1461 nt10.58□□□□□ -0.72
RAD3P06839 RDN18-1RDN18-1 1800 nt10.57□□□□□ -0.72
RAD3P06839 RDN18-2RDN18-2 1800 nt10.57□□□□□ -0.72
RAD3P06839 RPM1RPM1 483 nt10.54□□□□□ -0.72
RAD3P06839 YGR201CYGR201C 678 nt10.53□□□□□ -0.72
RAD3P06839 DUT1YBR252W 444 nt10.53□□□□□ -0.72
RAD3P06839 YMR244WYMR244W 1068 nt10.52□□□□□ -0.73
RAD3P06839 STR3YGL184C 1398 nt10.52□□□□□ -0.73
RAD3P06839 DAT1YML113W 747 nt10.51□□□□□ -0.73
RAD3P06839 MAE1YKL029C 2010 nt10.51□□□□□ -0.73
RAD3P06839 YGL114WYGL114W 2178 nt10.49□□□□□ -0.73
RAD3P06839 SFP1YLR403W 2052 nt10.48□□□□□ -0.73
RAD3P06839 TIM17YJL143W 477 nt10.47□□□□□ -0.73
RAD3P06839 RPC82YPR190C 1965 nt10.46□□□□□ -0.74
RAD3P06839 PAU7YAR020C 168 nt10.45□□□□□ -0.74
RAD3P06839 UBA4YHR111W 1323 nt10.44□□□□□ -0.74
RAD3P06839 YGL034CYGL034C 366 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms